Evidence map›Paper›PMID 33625673›Full record

ArticleMolecular diversity2022

Molecular dynamics-guided receptor-dependent 4D-QSAR studies of HDACs inhibitors.

Zhihao Hu, Qianxia Lin, Haiyun Liu, Tiansheng Zhao, Bowen Yang, Guogang Tu

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular diversity, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhihao HuDepartment of Medicinal Chemistry, School of Pharmaceutical Science, NanChang University, Nanchang, 330006, China.
Qianxia LinJiangxi University of Traditional Chinese Medicine, Nanchang, 330006, Jiangxi, People's Republic of China.
Haiyun LiuJiangxi University of Traditional Chinese Medicine, Nanchang, 330006, Jiangxi, People's Republic of China.
Tiansheng ZhaoDepartment of Medicinal Chemistry, School of Pharmaceutical Science, NanChang University, Nanchang, 330006, China.
Bowen YangDepartment of Medicinal Chemistry, School of Pharmaceutical Science, NanChang University, Nanchang, 330006, China.
Guogang TuDepartment of Medicinal Chemistry, School of Pharmaceutical Science, NanChang University, Nanchang, 330006, China. tugg199@yahoo.com.ORCID http://orcid.org/0000-0003-1264-9475

Funding

Graduate Research and Innovation Projects of Jiangsu Province (CN) CX2018190the Nanchang University Teaching Reform Foundation NCUJGLX-19-124the Nanchang University Teaching Reform Foundation NCUJGLX-19-130the Undergraduate Innovation and Entrepreneurship Foundation 2020CX289
6 · The paper itself

Abstract

Histone deacetylases (HDACs) were highlighted as a novel category of anticancer targets. Several HDACs inhibitors were approved for therapeutic use in cancer treatment. Comparatively, receptor-dependent 4D-QSAR, LQTA-QSAR, is a new approach which generates conformational ensemble profiles of compounds by molecular dynamics simulations at binding site of enzyme. This work describes a receptor-dependent 4D-QSAR studies on hydroxamate-based HDACs inhibitors. The 4D-QSAR model was generated by multiple linear regression method of QSARINS. Leave-N-out cross-validation (LNO) and Y-randomization were performed to analysis of the independent test set and to verify the robustness of the model. Best 4D-QSAR model showed the following statistics: R

Indexed as

Molecular Dynamics SimulationQuantitative Structure-Activity RelationshipBinding SitesHistone Deacetylase InhibitorsMolecular ConformationHistone Deacetylase Inhibitors4D-QSARHdacsMolecular dynamics simulations

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.