ArticleJournal of applied genetics2021
Genome-wide identification and function characterization of GATA transcription factors during development and in response to abiotic stresses and hormone treatments in pepper.
Article in Journal of applied genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 41 citations in OpenAlex.
- Genome-wide identification and characterization of GATA transcription factors in Avena sativa L. and expression profiling under salinity stress.Journal of applied genetics · 2026Article
- PlantGATA: a comprehensive database for plant GATA transcription factors.Functional & integrative genomics · 2026Article
- Genome-Wide Identification ofGenes · 2025Article
- Pan-Genome-Wide Investigation and Expression Analysis ofPlants (Basel, Switzerland) · 2025Article
- Identification and analysis of the GATA gene family in onion (Allium cepa L.) in response to chromium and salt stress.BMC genomics · 2025Article
- Genome-wide identification ofFrontiers in genetics · 2025Article
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- Comparative analysis of amino acid sequence level in plant GATA transcription factors.Scientific reports · 2024Article
- Decoding drought resilience: a comprehensive exploration of the cotton Eceriferum (CER) gene family and its role in stress adaptation.BMC plant biology · 2024Article
- GATA transcription factor in common bean: A comprehensive genome-wide functional characterization, identification, and abiotic stress response evaluation.Plant molecular biology · 2024Article
- Genome-wide characterization and expression analysis of GATA transcription factors under combination of light wavelengths and drought stress in potato.Plant direct · 2024Article
- Genome-wide identification of GATA transcription factor family and the effect of different light quality on the accumulation of terpenoid indole alkaloids in Uncaria rhynchophylla.Plant molecular biology · 2024Article
- Article
- Genome-Wide Identification ofInternational journal of molecular sciences · 2023Article
- Heat responsive geneFrontiers in plant science · 2023Article
- Genome-wide identification and characterization of GATA family genes in wheat.BMC plant biology · 2022Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2022Article
- Genome-wide comparative analyses of GATA transcription factors among seven Populus genomes.Scientific reports · 2021Article
- Genome-Wide Identification, Phylogenetic and Expression Pattern Analysis of GATA Family Genes in Cucumber (Plants (Basel, Switzerland) · 2021Article
- Identification of GATA Transcription Factors inFrontiers in plant science · 2021Article
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Authors and funding
7 authors at 2 institutions in 1 country.
Funding
Abstract
Pepper (Capsicum annuum L.) is an economically important vegetable crop whose production and quality are severely reduced under adverse environmental stress conditions. The GATA transcription factors belonging to type IV zinc-finger proteins, play a significant role in regulating light morphogenesis, nitrate assimilation, and organ development in plants. However, the functional characteristics of GATA gene family during development and in response to environmental stresses have not yet been investigated in pepper. In this study, a total of 28 pepper GATA (CaGATA) genes were identified. To gain an overview of the CaGATAs, we analyzed their chromosomal distribution, gene structure, conservative domains, cis-elements, phylogeny, and evolutionary relationship. We divided 28 CaGATAs into four groups distributed on 10 chromosomes, and identified 7 paralogs in CaGATA family of pepper and 35 orthologous gene pairs between CaGATAs and Arabidopsis GATAs (AtGATAs). The results of promoter cis-element analysis and the quantitative real-time PCR (qRT-PCR) analysis revealed that CaGATA genes were involved in regulating the plant growth and development and the responses to various abiotic stresses and hormone treatments in pepper. Tissue-specific expression analysis showed that most CaGATA genes were preferentially expressed in flower buds, flowers, and leaves. Several CaGATA genes, especially CaGATA14, were significantly regulated under multiple abiotic stresses, and CaGATA21 and CaGATA27 were highly responsive to phytohormone treatments. Taken together, our results lay a foundation for the biological function analysis of GATA gene family in pepper.
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