Evidence map›Paper›PMID 33622723›Full record

ArticlemBio2021

Toward a Comprehensive Analysis of Posttranscriptional Regulatory Networks: a New Tool for the Identification of Small RNA Regulators of Specific mRNAs.

Kook Han, Stephen Lory

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. TheJournal of bacteriology · 2025
    Article
  3. ThebioRxiv : the preprint server for biology · 2024
    Article
  4. RpoS and the bacterial general stress response.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  5. Review
  6. Article
  7. Hfq-licensed RNA-RNA interactome inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Small regulatory RNAs inmicroLife · 2023
    Review
  9. Review
  10. Article
  11. Conquering the host:Frontiers in microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kook HanDepartment of Microbiology, Harvard Medical School, Boston, Massachusetts, USA.
Stephen LoryDepartment of Microbiology, Harvard Medical School, Boston, Massachusetts, USA stephen_lory@hms.harvard.edu.ORCID 0000-0002-4079-5229
Harvard University · US

Funding

Genetically-encoded fluorescent RNA sensors for measuring transport of antibiotics into the cytoplasm of Gram-negative pathogens and development of efflux pump inhibitorsR01AI136789 · NIAID · HARVARD MEDICAL SCHOOL · PI LORY, STEPHEN · 2018 to 2022
$3.6M
NIAID NIH HHS R01 AI136789
6 · The paper itself

Abstract

A number of computational or experimental tools have been developed to identify targets of small RNA (sRNA) regulation. Here, we modified one of these methods, based on

Indexed as

Gene Expression Regulation, BacterialBacteriaEscherichia coliPseudomonas aeruginosaRNA, MessengerRNA Processing, Post-TranscriptionalRNA, Small UntranslatedVibrio choleraeRNA, MessengerRNA, Small Untranslateddiscovery of multiple small RNA regulatorsE. coliP. aeruginosaproximity ligationrGRIL-seqrpoSV. cholerae

Identifiers

PMID33622723
PMCPMC8545128
OpenAlexW3131576992

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.