Evidence map›Paper›PMID 33622476›Full record

ArticleEmerging infectious diseases2021

Genomic Characterization of hlyF-positive Shiga Toxin-Producing Escherichia coli, Italy and the Netherlands, 2000-2019.

Federica Gigliucci, Angela H A M van Hoek, Paola Chiani, Arnold Knijn, Fabio Minelli, Gaia Scavia, Eelco Franz, Stefano Morabito, Valeria Michelacci

Open access · diamondAbstract read
In one paragraph

Article in Emerging infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Emerging hybrid shigatoxigenic and enteropathogenicClinical microbiology reviews · 2025
    Review
  4. Phylogroup Homeostasis ofMicroorganisms · 2025
    Article
  5. Shiga Toxin-ProducingMicroorganisms · 2025
    Review
  6. Survival and genomic stability ofFrontiers in cellular and infection microbiology · 2025
    Article
  7. Article
  8. Characterization of the small RNAs carried by outer membrane vesicles produced byFrontiers in cellular and infection microbiology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Microorganisms · 2023
    Article
  13. Population Analysis of O26 Shiga Toxin-ProducingFrontiers in cellular and infection microbiology · 2022
    Article
  14. Exploring the nature of interaction between shiga toxin producingFrontiers in cellular and infection microbiology · 2022
    Article
  15. Article
  16. Epidemiology and genomic analysis of Shiga toxin-producingJournal of medical microbiology · 2021
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Federica Gigliucci
Angela H A M van Hoek
Paola Chiani
Arnold Knijn
Fabio Minelli
Gaia Scavia
Eelco Franz
Stefano Morabito
Valeria Michelacci
Istituto Superiore di Sanità · ITNational Institute for Public Health and the Environment · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli (STEC) O80:H2 has emerged in Europe as a cause of hemolytic uremic syndrome associated with bacteremia. STEC O80:H2 harbors the mosaic plasmid pR444_A, which combines several virulence genes, including hlyF and antimicrobial resistance genes. pR444_A is found in some extraintestinal pathogenic E. coli (ExPEC) strains. We identified and characterized 53 STEC strains with ExPEC-associated virulence genes isolated in Italy and the Netherlands during 2000-2019. The isolates belong to 2 major populations: 1 belongs to sequence type 301 and harbors diverse stx

Indexed as

Escherichia coli InfectionsEscherichia coli ProteinsShiga-Toxigenic Escherichia coliEuropeGenomicsHumansItalyNetherlandsVirulence FactorsEscherichia coli ProteinsVirulence Factorsantimicrobial resistancebacteriabacterial zoonosesenteric infectionsEscherichia coliExPECextraintestinal pathogenic E. colifoodborne diseasefood safetyhemolytic uremic syndromehlyFItalyphylogenesisShiga toxin–producing Escherichia coliSTECthe Netherlandswhole-genome sequencingzoonoses

Identifiers

PMID33622476
PMCPMC7920663
OpenAlexW3126459874

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.