Evidence map›Paper›PMID 33621486›Full record

ArticleCell stem cell2021

Reconstructing the Lineage Histories and Differentiation Trajectories of Individual Cancer Cells in Myeloproliferative Neoplasms.

Debra Van Egeren, Javier Escabi, Maximilian Nguyen, Shichen Liu, Christopher R Reilly, Sachin Patel, Baransel Kamaz, Maria Kalyva, Daniel J DeAngelo, Ilene Galinsky and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed
22.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 206 citations in OpenAlex.

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  15. Sabotaged Integral HSC Heterogeneity Underlies Essential Thrombocythemia Development.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 2 countries.

Debra Van EgerenDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA; Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Stem Cell Program, Boston Children's Hospital, Boston, MA 02115, USA.
Javier EscabiDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA; Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Research Scholar Initiative, Harvard Graduate School of Arts and Sciences, Cambridge, MA 02138, USA.
Maximilian NguyenDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA; Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Shichen LiuDepartment of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Christopher R ReillyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Sachin PatelStem Cell Program, Boston Children's Hospital, Boston, MA 02115, USA.
Baransel KamazDivision of Hematology, Brigham and Women's Hospital, Boston, MA 02115, USA.
Maria KalyvaEuropean Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK.
Daniel J DeAngeloDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Ilene GalinskyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Martha WadleighDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Eric S WinerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Marlise R LuskinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Richard M StoneDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Jacqueline S GarciaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Gabriela S HobbsLeukemia Center, Massachusetts General Hospital, Boston, MA 02114, USA.
Fernando D CamargoStem Cell Program, Boston Children's Hospital, Boston, MA 02115, USA; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Franziska MichorDepartment of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; The Center for Cancer Evolution, Dana-Farber Cancer Institute, Boston, MA 02115, USA; The Ludwig Center at Harvard, Boston, MA 02115, USA.
Ann MullallyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Division of Hematology, Brigham and Women's Hospital, Boston, MA 02115, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. Electronic address: ann_mullally@dfci.harvard.edu.
Isidro Cortes-CirianoEuropean Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK. Electronic address: icortes@ebi.ac.uk.
Sahand HormozDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA; Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. Electronic address: sahand_hormoz@hms.harvard.edu.
Dana-Farber Cancer Institute · USBoston Children's Hospital · USCenter for Systems Biology · USEuropean Bioinformatics Institute · GBBrigham and Women's Hospital · USBroad Institute · USMassachusetts General Hospital · US

Funding

TYROSINE KINASE ONCOGENESIS IN MYELOID LEUKEMIAP01CA066996 · NCI · DANA-FARBER CANCER INSTITUTE · PI SCOTT A ARMSTRONG · 1996 to 2026
$52.5M
Transcriptional and epigenetic heterogeneity of stem/progenitor cellsP01HL131477 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI David T Scadden · 2017 to 2026
$24.6M
Project 3: Single Cell Measures of Intratumor Diversity for Optimal Breast Cancer TherapyU54CA193461 · NCI · DANA-FARBER CANCER INST · PI POLYAK, KORNELIA · 2015 to 2020
$11.2M
Targeting SYK Kinase in AMLP50CA206963 · NCI · DANA-FARBER CANCER INST · PI ASTER, JON C. · 2017 to 2021
$10.6M
Training Program in Molecular HematologyT32HL116324 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI NANCY BERLINER · 2013 to 2026
$7.4M
Functional and Molecular Dissection of Mutant Calreticulin in Myeloproliferative NeoplasmsR01HL131835 · NHLBI · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI Ann Mullally · 2016 to 2026
$4.1M
Diversity in Biomedical Sciences Via Personalized Research and Education Programs for Post-BaccalaureatesR25GM109436 · NIGMS · HARVARD UNIVERSITY · PI D'SOUZA, VICTORIA MANUEL, VELEZ-RUIZ, GISSELLE A · 2016 to 2024
$2.5M
Tracing the lineage histories and differentiation trajectories of individual cancer cells in myeloproliferative neoplasmsR01HL158269 · NHLBI · DANA-FARBER CANCER INST · PI HORMOZ, SAHAND · 2021 to 2025
$2.3M
Lineage-based inference of cell state transition dynamics in development and diseaseR00GM118910 · NIGMS · DANA-FARBER CANCER INST · PI HORMOZ, SAHAND · 2017 to 2019
$747k
NCI NIH HHS P01 CA066996NCI NIH HHS P50 CA206963NCI NIH HHS U54 CA193461NHLBI NIH HHS P01 HL131477NHLBI NIH HHS R01 HL131835NHLBI NIH HHS R01 HL158269NHLBI NIH HHS T32 HL116324NIGMS NIH HHS R00 GM118910NIGMS NIH HHS R25 GM109436
6 · The paper itself

Abstract

Some cancers originate from a single mutation event in a single cell. Blood cancers known as myeloproliferative neoplasms (MPNs) are thought to originate when a driver mutation is acquired by a hematopoietic stem cell (HSC). However, when the mutation first occurs in individuals and how it affects the behavior of HSCs in their native context is not known. Here we quantified the effect of the JAK2-V617F mutation on the self-renewal and differentiation dynamics of HSCs in treatment-naive individuals with MPNs and reconstructed lineage histories of individual HSCs using somatic mutation patterns. We found that JAK2-V617F mutations occurred in a single HSC several decades before MPN diagnosis-at age 9 ± 2 years in a 34-year-old individual and at age 19 ± 3 years in a 63-year-old individual-and found that mutant HSCs have a selective advantage in both individuals. These results highlight the potential of harnessing somatic mutations to reconstruct cancer lineages.

Indexed as

Myeloproliferative DisordersNeoplasmsAdolescentAdultCell DifferentiationChildHematopoietic Stem CellsHumansJanus Kinase 2Middle AgedMutationYoung AdultJanus Kinase 2blood cancerJAK2lineage treemyeloproliferative neoplasmsingle cell sequencingstem cell dynamics

Identifiers

PMID33621486
PMCPMC7939520
OpenAlexW3132068389

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.