Evidence map›Paper›PMID 33620303›Full record

ArticleMicrobial genomics2021

Genomic epidemiology of a

Rhys A Farrer, Andrew M Borman, Teresa Inkster, Matthew C Fisher, Elizabeth M Johnson, Christina A Cuomo

Open access · goldAbstract readCase Reports
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. A Landscape of the Genomic Structure ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  3. Similar evolutionary trajectories in an environmentalProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Rhys A FarrerMedical Research Council Centre for Medical Mycology, University of Exeter, Exeter EX4 4PY, UK.
Andrew M BormanMedical Research Council Centre for Medical Mycology, University of Exeter, Exeter EX4 4PY, UK.
Teresa InksterDepartment of Microbiology, Queen Elizabeth University Hospital, Glasgow, UK.
Matthew C FisherMedical Research Council Centre for Global Infectious Disease Analysis, Imperial College London, London, UK.
Elizabeth M JohnsonMedical Research Council Centre for Medical Mycology, University of Exeter, Exeter EX4 4PY, UK.
Christina A CuomoBroad Institute of MIT and Harvard, Cambridge, MA, USA.
University of Exeter · GBBroad Institute · USImperial College London · GBQueen Elizabeth University Hospital · GB

Funding

Viral Genomics: evolution, spread, and host interactionsU19AI110818 · NIAID · BROAD INSTITUTE, INC. · PI SABETI, PARDIS CHRISTINE · 2014 to 2024
$66.5M
Medical Research Council MR/N006364/2Medical Research Council MR/R015600/1Medical Research Council MR/V033417/1NIAID NIH HHS U19 AI110818Wellcome TrustWellcome Trust 215239/Z/19/Z
6 · The paper itself

Abstract

In 2018, a cluster of two cases of cryptococcosis occurred at the Queen Elizabeth University Hospital (QEUH) in Glasgow, Scotland (UK). It was postulated that these cases may have been linked to pigeon droppings found on the hospital site, given there have been previous reports of

Indexed as

AgedAnimalsChildColumbidaeCryptococcosisCryptococcus neoformansFecesFemaleGenome, FungalGenomicsGenotypeHumansMalePhylogenyScotlandCryptococcus neoformansGlasgowinfection clustermycosisUnited Kingdomwhole-genome sequencing

Identifiers

PMID33620303
PMCPMC8190611
OpenAlexW3132899057

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.