Evidence map›Paper›PMID 33619305›Full record

ArticleCommunications biology2021

High-throughput screening and validation of antibodies against synaptic proteins to explore opioid signaling dynamics.

Mariana Lemos Duarte, Nikita A Trimbake, Achla Gupta, Christine Tumanut, Xiaomin Fan, Catherine Woods, Akila Ram, Ivone Gomes, Erin N Bobeck, Deborah Schechtman and 1 more

Open access · goldAbstract readComparative StudyValidation Study
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Mariana Lemos DuarteDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1603, New York City, NY, 10029, USA.ORCID 0000-0002-1611-7102
Nikita A TrimbakeDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1603, New York City, NY, 10029, USA.
Achla GuptaDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1603, New York City, NY, 10029, USA.
Christine TumanutAvantGen Inc., 6162 Nancy Ridge Dr #150, San Diego, CA, 92121, USA.
Xiaomin FanAvantGen Inc., 6162 Nancy Ridge Dr #150, San Diego, CA, 92121, USA.
Catherine WoodsAvantGen Inc., 6162 Nancy Ridge Dr #150, San Diego, CA, 92121, USA.
Akila RamDepartment of Biology, Utah State University, Logan, UT, 84322, USA.
Ivone GomesDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1603, New York City, NY, 10029, USA.
Erin N BobeckDepartment of Biology, Utah State University, Logan, UT, 84322, USA.ORCID 0000-0001-8421-883X
Deborah SchechtmanDepartment of Biochemistry, University of São Paulo, 748 Av Prof Lineu Prestes, room 1208 Cidade Universitaria, São Paulo, SP, 05508000, Brazil.
Lakshmi A DeviDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1603, New York City, NY, 10029, USA. lakshmi.devi@mssm.edu.ORCID 0000-0002-2179-2874
Icahn School of Medicine at Mount Sinai · USAvantGen (United States) · USUtah State University · USRegeneron (United States) · USUniversidade de São Paulo · BR

Funding

Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI ANGUS C. NAIRN, Kenneth Robert WILLIAMS · 2004 to 2026
$37.1M
Enzymes Involved in Neuropeptide Biosynthesis, Processing and RegulationR01NS026880 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DEVI, LAKSHMI A · 1994 to 2019
$6.5M
Regulation Of Opioid Receptor Signaling by Endogenous PeptidesR01DA008863 · NIDA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Lakshmi A Devi, Elyssa Margolis · 1995 to 2026
$6.1M
Post-translational Regulation of Opioid and Cannabinoid Receptors.R37DA008863 · NIDA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DEVI, LAKSHMI A · 2012 to 2021
$4.6M
Novel approach for developing antibody reagents to probe changes in the synapse pR44DA035531 · NIDA · AVANTGEN, INC. · PI DEVI, LAKSHMI A, FAN, XIAOMIN · 2013 to 2016
$1.8M
Post-translational regulation of opioid receptorsR56DA008863 · NIDA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DEVI, LAKSHMI A · 2007 to 2007
$381k
NIDA NIH HHS P30 DA018343NIDA NIH HHS R01 DA008863NIDA NIH HHS R37 DA008863NIDA NIH HHS R44 DA035531NIDA NIH HHS R56 DA008863NINDS NIH HHS R01 NS026880
6 · The paper itself

Abstract

Antibodies represent powerful tools to examine signal transduction pathways. Here, we present a strategy integrating multiple state-of-the-art methods to produce, validate, and utilize antibodies. Focusing on understudied synaptic proteins, we generated 137 recombinant antibodies. We used yeast display antibody libraries from the B cells of immunized rabbits, followed by FACS sorting under stringent conditions to identify high affinity antibodies. The antibodies were validated by high-throughput functional screening, and genome editing. Next, we explored the temporal dynamics of signaling in single cells. A subset of antibodies targeting opioid receptors were used to examine the effect of treatment with opiates that have played central roles in the worsening of the 'opioid epidemic.' We show that morphine and fentanyl exhibit differential temporal dynamics of receptor phosphorylation. In summary, high-throughput approaches can lead to the identification of antibody-based tools required for an in-depth understanding of the temporal dynamics of opioid signaling.

Indexed as

Antibody SpecificityHigh-Throughput Screening AssaysAnalgesics, OpioidAnimalsAntibodiesCell Line, TumorEnzyme ActivationFentanylHEK293 CellsHumansMaleMiceMice, Inbred C57BLMorphinePhosphorylationProtein Kinase CAnalgesics, OpioidAntibodiesFentanylMorphineProtein Kinase CReceptors, Opioid, mu

Identifiers

PMID33619305
PMCPMC7900253
OpenAlexW3129373510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.