Evidence map›Paper›PMID 33619301›Full record

ArticleScientific reports2021

Lysosome repositioning as an autophagy escape mechanism by Mycobacterium tuberculosis Beijing strain.

Thanida Laopanupong, Pinidphon Prombutara, Phongthon Kanjanasirirat, Salisa Benjaskulluecha, Atsadang Boonmee, Tanapat Palaga, Stephane Méresse, Jiraporn Paha, Tegar Adriansyah Putra Siregar, Tanawadee Khumpanied and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
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  4. Functional Analysis of Genes inIndian journal of microbiology · 2024
    Review
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  7. Frontiers in cellular and infection microbiology · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Thanida LaopanupongDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand.
Pinidphon PrombutaraOmics Sciences and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Phongthon KanjanasiriratExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Bangkok, Thailand.
Salisa BenjaskulluechaInter-Disciplinary Graduate Program in Medical Microbiology, Graduate School, Chulalongkorn University, Bangkok, Thailand.
Atsadang BoonmeeDepartment of Microbiology, Faculty of Science, Chulalongkorn University, Pathumwan, Bangkok, Thailand.
Tanapat PalagaInter-Disciplinary Graduate Program in Medical Microbiology, Graduate School, Chulalongkorn University, Bangkok, Thailand.
Stephane MéresseAix Marseille University, CNRS, INSERM, CIML, Marseille, France.
Jiraporn PahaDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand.
Tegar Adriansyah Putra SiregarDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand.
Tanawadee KhumpaniedExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Bangkok, Thailand.
Suparerk BorwornpinyoExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Bangkok, Thailand.
Angkana ChaiprasertDrug-Resistance Tuberculosis Research Fund, Siriraj Foundation, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Pongsak UtaisincharoenDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand.
Marisa PonpuakDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Road, Bangkok, 10400, Thailand. marisa.pon@mahidol.ac.th.
Mahidol University · THChulalongkorn University · THAix-Marseille Université · FRSiriraj Hospital · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Induction of host cell autophagy by starvation was shown to enhance lysosomal delivery to mycobacterial phagosomes, resulting in the restriction of Mycobacterium tuberculosis reference strain H37Rv. Our previous study showed that strains belonging to M. tuberculosis Beijing genotype resisted starvation-induced autophagic elimination but the factors involved remained unclear. Here, we conducted RNA-Seq of macrophages infected with the autophagy-resistant Beijing strain (BJN) compared to macrophages infected with H37Rv upon autophagy induction by starvation. Results identified several genes uniquely upregulated in BJN-infected macrophages but not in H37Rv-infected cells, including those encoding Kxd1 and Plekhm2, which function in lysosome positioning towards the cell periphery. Unlike H37Rv, BJN suppressed enhanced lysosome positioning towards the perinuclear region and lysosomal delivery to its phagosome upon autophagy induction by starvation, while depletion of Kxd1 and Plekhm2 reverted such effects, resulting in restriction of BJN intracellular survival upon autophagy induction by starvation. Taken together, these data indicated that Kxd1 and Plekhm2 are important for the BJN strain to suppress lysosome positioning towards the perinuclear region and lysosomal delivery into its phagosome during autophagy induction by starvation to evade starvation-induced autophagic restriction.

Indexed as

AutophagyHost-Pathogen InteractionsCarrier ProteinsComputational BiologyGene Expression ProfilingGene OntologyHumansLysosomesMolecular Sequence AnnotationMycobacterium tuberculosisTranscriptomeTuberculosisCarrier ProteinsKXD1 protein, human

Identifiers

PMID33619301
PMCPMC7900199
OpenAlexW3129564416

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.