Evidence map›Paper›PMID 33618998›Full record

ReviewTrends in cancer2021

Concepts and Applications of Information Theory to Immuno-Oncology.

Aleksandra Karolak, Sergio Branciamore, Jeannine S McCune, Peter P Lee, Andrei S Rodin, Russell C Rockne

Abstract readReview
In one paragraph

Review in Trends in cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. BannMI deciphers potentialBioinformatics advances · 2024
    Article
  5. Article
  6. Article
  7. Quantifying information of intracellular signaling: progress with machine learning.Reports on progress in physics. Physical Society (Great Britain) · 2022
    Review
  8. Article
  9. Tipping the Balance: A Criticality Perspective.Entropy (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aleksandra KarolakDepartment of Hematologic Malignancies Translational Science, Beckman Research Institute of City of Hope, Duarte, CA, USA; Division of Mathematical Oncology, Department of Computational and Quantitative Medicine, Beckman Research Institute of City of Hope, Duarte, CA, USA. Electronic address: akarolak@coh.org.
Sergio BranciamoreDepartment of Computational and Quantitative Medicine, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Jeannine S McCuneDepartment of Hematologic Malignancies Translational Science, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Peter P LeeDepartment of Immuno-Oncology, Beckman Research Institute of City of Hope, CA, USA.
Andrei S RodinDepartment of Computational and Quantitative Medicine, Beckman Research Institute of City of Hope, Duarte, CA, USA.
Russell C RockneDivision of Mathematical Oncology, Department of Computational and Quantitative Medicine, Beckman Research Institute of City of Hope, Duarte, CA, USA.

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
Optimizing GVHD Prevention with Systems Pharmacology ModelsU01CA239373 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI HORNE, DAVID A., MAGER, DONALD E · 2019 to 2023
$3.0M
Experimental-Computational Synthesis of Altered Immune Signaling in Breast CancerU01CA232216 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI LEE, PETER POON-HANG, ROCKNE, RUSSELL CHRISTIAN · 2019 to 2023
$3.0M
An integrated toolkit combining computational systems biology techniques with molecular dynamics simulations to delineate functionality of GPCRsR01LM013876 · NLM · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI RODIN, ANDREI, VAIDEHI, NAGARAJAN · 2022 to 2025
$1.5M
Scalable Bayesian Network analysis of multimodal FACS and SUMOylation data, with generalization to other big mixed biological datasetsR01LM013138 · NLM · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI RODIN, ANDREI · 2020 to 2022
$776k
NCI NIH HHS P30 CA033572NCI NIH HHS U01 CA232216NCI NIH HHS U01 CA239373NLM NIH HHS R01 LM013138NLM NIH HHS R01 LM013876
6 · The paper itself

Abstract

Recent successes of immune-modulating therapies for cancer have stimulated research on information flow within the immune system and, in turn, clinical applications of concepts from information theory. Through information theory, one can describe and formalize, in a mathematically rigorous fashion, the function of interconnected components of the immune system in health and disease. Specifically, using concepts including entropy, mutual information, and channel capacity, one can quantify the storage, transmission, encoding, and flow of information within and between cellular components of the immune system on multiple temporal and spatial scales. To understand, at the quantitative level, immune signaling function and dysfunction in cancer, we present a methodology-oriented review of information-theoretic treatment of biochemical signal transduction and transmission coupled with mathematical modeling.

Indexed as

Information TheoryAllergy and ImmunologyAnimalsHumansMedical OncologyNeoplasmsSignal Transductionchannel capacitycytokinesentropyimmune signalingimmuno-oncologyinformation theory

Identifiers

PMID33618998
PMCPMC8156485

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.