Evidence map›Paper›PMID 33616445›Full record

ArticleThe CRISPR journal2021

Development and Characterization of a Modular CRISPR and RNA Aptamer Mediated Base Editing System.

Juan Carlos Collantes, Victor M Tan, Huiting Xu, Melany Ruiz-Urigüen, Amer Alasadi, Jingjing Guo, Hanlin Tao, Chi Su, Katarzyna M Tyc, Tommaso Selmi and 6 more

Open access · greenAbstract read
In one paragraph

Article in The CRISPR journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Expanding the CRISPR/Cas toolkit: applications in proteomics and theranostics.Frontiers in bioengineering and biotechnology · 2025
    Review
  4. Article
  5. CRISPR technologies for genome, epigenome and transcriptome editing.Nature reviews. Molecular cell biology · 2024
    Review
  6. Article
  7. Review
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Juan Carlos CollantesDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Victor M TanDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Huiting XuDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Melany Ruiz-UrigüenDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Amer AlasadiDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Jingjing GuoDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Hanlin TaoDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Chi SuDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Katarzyna M TycDepartment of Genetics, Rutgers, The State University of New Jersey-Piscataway, New Jersey, USA.
Tommaso SelmiHorizon Discovery, Cambridge, United Kingdom.
John J LambourneHorizon Discovery, Cambridge, United Kingdom.
Jennifer A HarbottleHorizon Discovery, Cambridge, United Kingdom.
Jesse StombaughHorizon Discovery, Cambridge, United Kingdom.
Jinchuan XingDepartment of Genetics, Rutgers, The State University of New Jersey-Piscataway, New Jersey, USA.
Ceri M WigginsHorizon Discovery, Cambridge, United Kingdom.
Shengkan JinDepartment of Pharmacology, Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.
Johnson University · USHorizon Discovery (United Kingdom) · GBRutgers, The State University of New Jersey · US

Funding

UMDNJ TRAINING GRANT IN BIOTECHNOLOGYT32GM008339 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI YARMUSH, MARTIN L · 1989 to 2019
$6.1M
Rutgers Biotechnology Training ProgramT32GM135141 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI ANN M. STOCK, Martin L Yarmush · 2020 to 2026
$3.5M
Prevention and treatment of ALD by inducing hepatic mitochondrial uncouplingR21AA027050 · NIAAA · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI DING, WEN-XING, JIN, SHENGKAN VICTOR · 2018 to 2019
$428k
Targeting cell metabolism for preventing and treating metastatic colon cancerR21CA216604 · NCI · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI JIN, SHENGKAN VICTOR · 2017 to 2018
$380k
NIGMS NIH HHS T32 GM008339
6 · The paper itself

Abstract

Conventional CRISPR approaches for precision genome editing rely on the introduction of DNA double-strand breaks (DSB) and activation of homology-directed repair (HDR), which is inherently genotoxic and inefficient in somatic cells. The development of base editing (BE) systems that edit a target base without requiring generation of DSB or HDR offers an alternative. Here, we describe a novel BE system called Pin-point

Indexed as

Aptamers, NucleotideClustered Regularly Interspaced Short Palindromic RepeatsGene EditingRNA EditingAnimalsBacteriaCRISPR-Cas SystemsExome SequencingGreen Fluorescent ProteinsHEK293 CellsHumansINDEL MutationRecombinational DNA RepairRNA, Guide, CRISPR-Cas SystemsAptamers, NucleotideGreen Fluorescent ProteinsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID33616445
PMCPMC7898459
OpenAlexW3131823886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.