Evidence map›Paper›PMID 33615984›Full record

ReviewGut microbes

Carbohydrates great and small, from dietary fiber to sialic acids: How glycans influence the gut microbiome and affect human health.

Joanna K Coker, Oriane Moyne, Dmitry A Rodionov, Karsten Zengler

Open access · goldAbstract readReview
In one paragraph

Review in Gut microbes. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
  2. DietaryAnimals : an open access journal from MDPI · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. The gut as a central hub for multi-organ crosstalk in aging.Cellular and molecular life sciences : CMLS · 2026
    Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Carbohydrate Intake and Bacterial Vaginosis: A Systematic Review.American journal of lifestyle medicine · 2025
    Review
  20. Environmental and Maternal Imprints on Infant Gut Metabolic Programming.bioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Joanna K CokerDepartment of Pediatrics, University of California , San Diego, La Jolla, USA.ORCID 0000-0001-7306-6316
Oriane MoyneDepartment of Pediatrics, University of California , San Diego, La Jolla, USA.ORCID 0000-0002-0475-6177
Dmitry A RodionovSanford Burnham Prebys Medical Discovery Institute , La Jolla, USA.
Karsten ZenglerDepartment of Pediatrics, University of California , San Diego, La Jolla, USA.ORCID 0000-0002-8062-3296
University of California System · USRussian Academy of Sciences · RU

Funding

Targeted Microbiome Transplant in Atopic DermatitisU19AI117673 · NIAID · NATIONAL JEWISH HEALTH · PI BECK, LISA ANN · 2015 to 2019
$30.6M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
REGULATION OF GENE EXPRESSION - SMALL INTESTINER01DK030292 · NIDDK · WASHINGTON UNIVERSITY · PI JEFFREY I GORDON, ANDREI L OSTERMAN · 1986 to 2026
$6.5M
Training Program in Quantitative Integrative BiologyT32GM127235 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HWA, TERENCE · 2018 to 2022
$1.3M
Harnessing Neu5Gc sialidases to treat Neu5Gc-associated atherosclerosisF30HL152666 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI COKER, JOANNA · 2020 to 2021
$77k
NHLBI NIH HHS F30 HL152666NIAID NIH HHS U19 AI117673NIDDK NIH HHS R01 DK030292NIGMS NIH HHS T32 GM007198NIGMS NIH HHS T32 GM127235
6 · The paper itself

Abstract

Gut microbiome composition depends heavily upon diet and has strong ties to human health. Dietary carbohydrates shape the gut microbiome by providing a potent nutrient source for particular microbes. This review explores how dietary carbohydrates in general, including individual monosaccharides and complex polysaccharides, influence the gut microbiome with subsequent effects on host health and disease. In particular, the effects of sialic acids, a prominent and influential class of monosaccharides, are discussed. Complex plant carbohydrates, such as dietary fiber, generally promote microbial production of compounds beneficial to the host while preventing degradation of host carbohydrates from colonic mucus. In contrast, simple and easily digestible sugars such as glucose are often associated with adverse effects on health and the microbiome. The monosaccharide class of sialic acids exerts a powerful but nuanced effect on gut microbiota. Sialic acid consumption (in monosaccharide form, or as part of human milk oligosaccharides or certain animal-based foods) drives the growth of organisms with sialic acid metabolism capabilities. Minor chemical modifications of Neu5Ac, the most common form of sialic acid, can alter these effects. All aspects of carbohydrate composition are therefore relevant to consider when designing dietary therapeutic strategies to alter the gut microbiome.

Indexed as

AnimalsBacteriaDietary CarbohydratesDietary FiberGastrointestinal MicrobiomeHumansMonosaccharidesMucinsPolysaccharidesSialic AcidsDietary CarbohydratesDietary FiberMonosaccharidesMucinsPolysaccharidesSialic AcidsCarbohydratesdietfiberglycansgut microbiomehuman milk oligosaccharidesmucin-linked O-glycansneu5gcsialic acids

Identifiers

PMID33615984
PMCPMC7899658
OpenAlexW3132683748

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.