Evidence map›Paper›PMID 33615748›Full record

ArticleThe plant genome2021

Genome-wide association study of resistance to PstS2 and Warrior races of Puccinia striiformis f. sp. tritici (stripe rust) in bread wheat landraces.

Muhammad Massub Tehseen, Fatma Aykut Tonk, Muzaffer Tosun, Ahmed Amri, Carolina P Sansaloni, Ezgi Kurtulus, Mariana Yazbek, Khaled Al-Sham'aa, Izzet Ozseven, Luqman Bin Safdar and 2 more

Abstract read
In one paragraph

Article in The plant genome, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Genome-wide association mapping for the identification of stripe rust resistance loci in US hard winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Genetic Basis of Resistance toPlants (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Genomic signatures of selection for resistance to stripe rust in Austrian winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Muhammad Massub TehseenDepartment of Field Crops, Ege University, Izmir, Turkey.ORCID 0000-0003-0429-2269
Fatma Aykut TonkDepartment of Field Crops, Ege University, Izmir, Turkey.
Muzaffer TosunDepartment of Field Crops, Ege University, Izmir, Turkey.
Ahmed AmriICARDA-PreBreeding & Genebank Operations, Biodiversity and Crop Improvement Program, Rabat, Morocco.
Carolina P SansaloniGenetic Resources Program, CIMMYT, Mexico.
Ezgi KurtulusTurkey-ICARDA Regional Cereal Rust Research Center (RCRRC), P.O. Box 35661, Menemen, Izmir, Turkey.
Mariana YazbekICARDA-Genetic Resources, PreBreeding & Genebank Operations, Biodiversity and Crop Improvement Program, Terbol, Lebanon.
Khaled Al-Sham'aaGeoinformatics & Research Data Management, ICARDA, Beirut, Lebanon.ORCID 0000-0002-7668-3798
Izzet OzsevenAgean Agricultural Research Institute, Regional Cereal Rust Research Center (RCRRC), P.O. Box 35661, Menemen, Izmir, Turkey.
Luqman Bin SafdarDepartment of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan.ORCID 0000-0002-9544-8259
Ali ShehadehICARDA-Genetic Resources, PreBreeding & Genebank Operations, Biodiversity and Crop Improvement Program, Terbol, Lebanon.
Kumarse NazariTurkey-ICARDA Regional Cereal Rust Research Center (RCRRC), P.O. Box 35661, Menemen, Izmir, Turkey.ORCID 0000-0001-9348-892X

Funding

Bill & Melinda Gates Foundation OPP1133199
6 · The paper itself

Abstract

Stripe or yellow rust, caused by Puccinia striiformis Westend. f. sp. tritici is a major threat to bread wheat production worldwide. The breakdown in resistance of certain major genes and newly emerging aggressive races of stripe rusts pose serious concerns in all main wheat growing areas of the world. To identify new sources of resistance and associated QTL for effective utilization in future breeding programs an association mapping (AM) panel comprising of 600 bread wheat landraces collected from eight different countries conserved at ICARDA gene bank were evaluated for seedling and adult plant resistance against the PstS2 and Warrior races of stripe rust at the Regional Cereal Rust Research Center (RCRRC), Izmir, Turkey during 2016, 2018 and 2019. A set of 25,169 informative SNP markers covering the whole genome were used to examine the population structure, linkage disequilibrium and marker-trait associations in the AM panel. The genome-wide association study (GWAS) was carried out using a Mixed Linear Model (MLM). We identified 47 SNP markers across 19 chromosomes with significant SNP-trait associations for both seedling stage and adult plant resistance. The threshold of significance for all SNP-trait associations was determined by the false discovery rate (q) ≤ 0.05. Three genomic regions (QYr.1D_APR, QYr.3A_seedling and QYr.7D_seedling) identified in this study do not correspond to previously reported Yr genes or QTL, suggesting new genomic regions for stripe rust resistance.

Indexed as

Genome-Wide Association StudyTriticumBreadDisease ResistancePlant BreedingPlant DiseasesPucciniaQuantitative Trait LociTurkey

Identifiers

PMID33615748
PMCPMC12807014

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.