Evidence map›Paper›PMID 33615401›Full record

ArticleJournal of computer-aided molecular design2021

A computer-aided approach to identify novel Leishmania major protein disulfide isomerase inhibitors for treatment of leishmaniasis.

Noureddine Ben Khalaf, Susie Pham, Giuseppe Romeo, Sara Abdelghany, Sebastiano Intagliata, Peter Sedillo, Loredana Salerno, Jessica Gonzales, Dahmani M Fathallah, Douglas J Perkins and 2 more

Abstract read
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In one paragraph

Article in Journal of computer-aided molecular design, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Noureddine Ben KhalafDepartment of Life Sciences, Health Biotechnology Program, College of Graduates Studies, King Fahd Chair for Health Biotechnology, Arabian Gulf University, Road 2904 Building 293, Manama, 329, Kingdom of Bahrain. noureddinek@agu.edu.bh.ORCID 0000-0001-7573-754X
Susie PhamCenter for Global Health, University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
Giuseppe RomeoDepartment of Drug Sciences, University of Catania, V.le A. Doria 6, 95125, Catania, Italy.
Sara AbdelghanyDepartment of Molecular Medicine, Princess Al-Jawhara Center for Genetics and Inherited Diseases, College of Medicine and Medical Sciences, Arabian Gulf University, Manama, Bahrain.
Sebastiano IntagliataDepartment of Drug Sciences, University of Catania, V.le A. Doria 6, 95125, Catania, Italy.
Peter SedilloCenter for Global Health, University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
Loredana SalernoDepartment of Drug Sciences, University of Catania, V.le A. Doria 6, 95125, Catania, Italy.
Jessica GonzalesCenter for Global Health, University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
Dahmani M FathallahDepartment of Life Sciences, Health Biotechnology Program, College of Graduates Studies, King Fahd Chair for Health Biotechnology, Arabian Gulf University, Road 2904 Building 293, Manama, 329, Kingdom of Bahrain.
Douglas J PerkinsCenter for Global Health, University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
Ivy HurwitzCenter for Global Health, University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
Valeria PittalàDepartment of Drug Sciences, University of Catania, V.le A. Doria 6, 95125, Catania, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leishmaniasis is an infectious disease caused by parasites of the genus Leishmania and transmitted by the bite of a sand fly. To date, most available drugs for treatment are toxic and beyond the economic means of those affected by the disease. Protein disulfide isomerase (PDI) is a chaperone protein that plays a major role in the folding of newly synthesized proteins, specifically assisting in disulfide bond formation, breakage, or rearrangement in all non-native proteins. In previous work, we demonstrated that Leishmania major PDI (LmPDI) has an essential role in pathogen virulence. Furthermore, inhibition of LmPDI further blocked parasite infection in macrophages. In this study, we utilized a computer-aided approach to design a series of LmPDI inhibitors. Fragment-based virtual screening allowed for the understanding of the inhibitors' modes of action on LmPDI active sites. The generated compounds obtained after multiple rounds of virtual screening were synthesized and significantly inhibited target LmPDI reductase activity and were shown to decrease in vitro parasite growth in human monocyte-derived macrophages. This novel cheminformatics and synthetic approach led to the identification of a new series of compounds that might be optimized into novel drugs, likely more specific and less toxic for the treatment of leishmaniasis.

Indexed as

Anti-Infective AgentsCatalytic DomainComputer-Aided DesignDrug DesignEnzyme InhibitorsHexachloropheneHumansLeishmania majorLeishmaniasisMolecular Docking SimulationProtein BindingProtein ConformationProtein Disulfide-IsomerasesSmall Molecule LibrariesStructure-Activity RelationshipAnti-Infective AgentsEnzyme InhibitorsHexachloropheneProtein Disulfide-IsomerasesSmall Molecule LibrariesCheminformaticsDrug designHexachloropheneLeishmaniaProtein disulfide isomerase

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.