Evidence map›Paper›PMID 33614977›Full record

ArticleWellcome open research2020

Genomic diversity of

Mark Achtman, Zhemin Zhou, Nabil-Fareed Alikhan, William Tyne, Julian Parkhill, Martin Cormican, Chien-Shun Chiou, Mia Torpdahl, Eva Litrup, Deirdre M Prendergast and 10 more

Abstract read
In one paragraph

Article in Wellcome open research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Genomic Evidence of Multidrug-ResistantbioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. One Health Investigation of a HouseholdPathogens (Basel, Switzerland) · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Comparative Genomic Profiles ofMicroorganisms · 2025
    Article
  15. Molecular epidemiology ofAntimicrobial agents and chemotherapy · 2025
    Article
  16. ISiScience · 2025
    Article
  17. Article
  18. Article
  19. Whole-genome sequencing analysis ofFrontiers in veterinary science · 2025
    Article
  20. Phenotypic and Genotypic Characterization ofAntibiotics (Basel, Switzerland) · 2024
    Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Mark AchtmanWarwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.ORCID https://orcid.org/0000-0001-6815-0070
Zhemin ZhouWarwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.ORCID https://orcid.org/0000-0001-9783-0366
Nabil-Fareed AlikhanWarwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.ORCID https://orcid.org/0000-0002-1243-0767
William TyneWarwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.
Julian ParkhillDepartment of Veterinary Medicine, University of Cambridge, Cambridge, CB3 0ES, UK.ORCID https://orcid.org/0000-0002-7069-5958
Martin CormicanNational Salmonella, Shigella and Listeria Reference Laboratory, Galway, H91 YR71, Ireland.
Chien-Shun ChiouCentral Regional Laboratory, Center for Diagnostics and Vaccine Development, Centers for Disease Control, Taichung, None, Taiwan.
Mia TorpdahlStatens Serum Institut, Copenhagen S, DK-2300, Denmark.
Eva LitrupStatens Serum Institut, Copenhagen S, DK-2300, Denmark.
Deirdre M PrendergastBackweston complex, Department of Agriculture, Food and the Marine (DAFM), Celbridge, Co. Kildare, W23 X3PH, Ireland.
John E MooreNorthern Ireland Public Health Laboratory, Department of Bacteriology, Belfast City Hospital, Belfast, BT9 7AD, UK.ORCID https://orcid.org/0000-0002-5243-5108
Sam StrainAnimal Health and Welfare NI, Dungannon, BT71 6JT, UK.
Christian KornschoberInstitute for Medical Microbiology and Hygiene, Austrian Agency for Health and Food Safety (AGES), Graz, 8010, Austria.
Richard MeinersmannUS National Poultry Research Center, USDA Agricultural Research Service, Athens, GA, 30605, USA.ORCID https://orcid.org/0000-0003-0572-8060
Alexandra UesbeckInstitute for Medical Microbiology, Immunology, and Hygiene, University of Cologne, Cologne, 50935, Germany.
François-Xavier WeillUnité des bactéries pathogènes entériques, Institut Pasteur, Paris, cedex 15, France.ORCID https://orcid.org/0000-0001-9941-5799
Aidan CoffeyCork Institute of Technology, Cork, T12P928, Ireland.
Helene Andrews-PolymenisDept. of Microbial Pathogenesis and Immunology, College of Medicine Texas A&M University, Bryan, TX, 77807, USA.
Roy Curtiss RdDept. of Infectious Diseases & Immunology, College of Veterinary Medicine, University of Florida, Gainesville, Florida, 32611, USA.
Séamus FanningUCD-Centre for Food Safety, University College Dublin, Dublin, D04 N2E5, Ireland.

Funding

Wellcome Trust 202792/Z/16/Z
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

High throughput sequencingLarge scale genomic databasePopulation genomicsSalmonella

Identifiers

PMID33614977
PMCPMC7869069

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.