Evidence map›Paper›PMID 33614939›Full record

ArticleLaryngoscope investigative otolaryngology2021

Clinical trials optimizing investigator and self-collection of buccal cells for RNA yield.

Jessica L Geiger, Elizabeth D Cedars, Yan Zang, Daniel P Normolle, Hua Li, Jennifer R Grandis, Sara Centuori, Daniel E Johnson, Julie E Bauman

Open access · goldAbstract read
In one paragraph

Article in Laryngoscope investigative otolaryngology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jessica L GeigerDepartment of Hematology and Medical Oncology Taussig Cancer Institute, Cleveland Clinic Cleveland Ohio USA.
Elizabeth D CedarsDepartment of Otolaryngology-Head and Neck Surgery University of California San Francisco San Francisco California USA.
Yan ZangDepartment of Medicine University of Pittsburgh School of Medicine Pittsburgh Pennsylvania USA.
Daniel P NormolleDepartment of Biostatistics University of Pittsburgh Graduate School of Public Health Pittsburgh Pennsylvania USA.
Hua LiDepartment of Otolaryngology-Head and Neck Surgery University of California San Francisco San Francisco California USA.
Jennifer R GrandisDepartment of Otolaryngology-Head and Neck Surgery University of California San Francisco San Francisco California USA.
Sara CentuoriDepartment of Medicine, Division of Hematology/Oncology University of Arizona College of Medicine Tucson Arizona USA.
Daniel E JohnsonDepartment of Otolaryngology-Head and Neck Surgery University of California San Francisco San Francisco California USA.
Julie E BaumanDepartment of Medicine, Division of Hematology/Oncology University of Arizona College of Medicine Tucson Arizona USA.ORCID https://orcid.org/0000-0002-1398-6636
University of California, San Francisco · USUniversity of Arizona · USUniversity of Pittsburgh · USCleveland Clinic · US

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Dan Theodorescu · 1985 to 2026
$110.2M
WILD TYPE P53-BASED ADJUVANT IMMUNOTHERAPY FOR SCCHNP50CA097190 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 2004 to 2026
$49.6M
University of Arizona Cancer Prevention Clinical Trials Network (UA CP-CTNet)UG1CA242596 · NCI · UNIVERSITY OF ARIZONA · PI Julie E Bauman, Patricia Ann Thompson · 2019 to 2026
$11.5M
Integrating genomics and the protein interactome for HPV+ head and neck cancer therapyR35CA231998 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRANDIS, JENNIFER RUBIN · 2018 to 2024
$6.2M
NCI NIH HHS P30 CA023074NCI NIH HHS P50 CA097190NCI NIH HHS R35 CA231998NCI NIH HHS UG1 CA242596
6 · The paper itself

Abstract

objectiveBuccal cells are an ideal surrogate tissue for studying biologic effects of carcinogens or drugs, however inherent fragility and salivary RNAses limit RNA yield. We conducted healthy volunteer trials to optimize collection conditions.

methodsWe conducted: (a) a single-arm crossover study evaluating four test conditions on RNA yield by buccal cytobrush; (b) a single-arm prospective study evaluating RNA yield by investigator vs self-collection.

resultsAntecedent toothbrushing, time of day, and number of cytobrush strokes did not significantly impact RNA yield. RNA yield was doubled by using 2 vs 1 cytobrush per buccal surface (

conclusionRNA yield was doubled by using two cytobrushes per buccal surface. Healthy volunteers can self-collect sufficient buccal RNA for gene expression studies. Techniques from these pragmatic trials could enhance availability of a limited tissue for serial biomarker measurements. LEVEL OF EVIDENCE: 1b-Prognosis Study (Individual prospective cohort study).

Indexed as

biomarkerbuccal cellcytobrushevidence‐based medicinemolecular biologyoral cavityRNAself‐collection

Identifiers

PMID33614939
PMCPMC7883625
OpenAlexW3125924430

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.