Evidence map›Paper›PMID 33613650›Full record

ReviewFrontiers in genetics2021

Crosstalk Between mRNA 3'-End Processing and Epigenetics.

Lindsey V Soles, Yongsheng Shi

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lindsey V SolesDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California Irvine, Irvine, CA, United States.
Yongsheng ShiDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California Irvine, Irvine, CA, United States.
University of California, Irvine · US

Funding

Characterization of the mammalian mRNA-3'-end processing complexR01GM090056 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI SHI, YONGSHENG · 2010 to 2022
$4.2M
Training Program in Stem Cell Translational Medicine for Neurological DisordersT32NS082174 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI PETER John DONOVAN, Leslie Michels Thompson · 2013 to 2026
$3.3M
Herpes simplex virus-mediated regulation of host gene expressionR01GM128441 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDRI-GOLDIN, ROZANNE M, SHI, YONGSHENG · 2018 to 2021
$1.6M
NIGMS NIH HHS R01 GM090056NIGMS NIH HHS R01 GM128441NINDS NIH HHS T32 NS082174
6 · The paper itself

Abstract

The majority of eukaryotic genes produce multiple mRNA isoforms by using alternative poly(A) sites in a process called alternative polyadenylation (APA). APA is a dynamic process that is highly regulated in development and in response to extrinsic or intrinsic stimuli. Mis-regulation of APA has been linked to a wide variety of diseases, including cancer, neurological and immunological disorders. Since the first example of APA was described 40 years ago, the regulatory mechanisms of APA have been actively investigated. Conventionally, research in this area has focused primarily on the roles of regulatory cis-elements and trans-acting RNA-binding proteins. Recent studies, however, have revealed important functions for epigenetic mechanisms, including DNA and histone modifications and higher-order chromatin structures, in APA regulation. Here we will discuss these recent findings and their implications for our understanding of the crosstalk between epigenetics and mRNA 3'-end processing.

Indexed as

chromatinepigeneticshistonemRNA 3' processingpolyadenylation

Identifiers

PMID33613650
PMCPMC7890070
OpenAlexW3128712684

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.