Evidence map›Paper›PMID 33608459›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Tissue folding at the organ-meristem boundary results in nuclear compression and chromatin compaction.

Kateryna Fal, Niklas Korsbo, Juan Alonso-Serra, Jose Teles, Mengying Liu, Yassin Refahi, Marie-Edith Chabouté, Henrik Jönsson, Olivier Hamant

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Mechanics of compression-driven morphogenesis.Development (Cambridge, England) · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Reorganizing chromatin by cellular deformation.Current opinion in cell biology · 2024
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Mechanosensing, from forces to structures.Frontiers in plant science · 2022
    Review
  16. Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Kateryna FalLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Université Claude Bernard Lyon 1, ENS de Lyon, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), CNRS, 69364 Lyon Cedex 07, France; kateryna.fal@cea.fr Henrik.Jonsson@slcu.cam.ac.uk olivier.hamant@ens-lyon.fr.ORCID 0000-0001-5187-0290
Niklas KorsboSainsbury Laboratory, University of Cambridge, Cambridge CB2 1LR, United Kingdom.ORCID 0000-0001-9811-3190
Juan Alonso-SerraLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Université Claude Bernard Lyon 1, ENS de Lyon, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), CNRS, 69364 Lyon Cedex 07, France.
Jose TelesSainsbury Laboratory, University of Cambridge, Cambridge CB2 1LR, United Kingdom.
Mengying LiuLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Université Claude Bernard Lyon 1, ENS de Lyon, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), CNRS, 69364 Lyon Cedex 07, France.
Yassin RefahiSainsbury Laboratory, University of Cambridge, Cambridge CB2 1LR, United Kingdom.ORCID 0000-0001-6136-608X
Marie-Edith ChaboutéInstitut de Biologie Moléculaire des Plantes, CNRS, Université de Strasbourg, 67084 Strasbourg Cedex, France.ORCID 0000-0001-8688-721X
Henrik JönssonDepartment of Astronomy and Theoretical Physics, Lund University, SE22362 Lund, Sweden; kateryna.fal@cea.fr Henrik.Jonsson@slcu.cam.ac.uk olivier.hamant@ens-lyon.fr.ORCID 0000-0003-2340-588X
Olivier HamantLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Université Claude Bernard Lyon 1, ENS de Lyon, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), CNRS, 69364 Lyon Cedex 07, France; kateryna.fal@cea.fr Henrik.Jonsson@slcu.cam.ac.uk olivier.hamant@ens-lyon.fr.ORCID 0000-0001-6906-6620
Université Claude Bernard Lyon 1 · FRUniversity of Cambridge · GBCentre National de la Recherche Scientifique · FRLund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Artificial mechanical perturbations affect chromatin in animal cells in culture. Whether this is also relevant to growing tissues in living organisms remains debated. In plants, aerial organ emergence occurs through localized outgrowth at the periphery of the shoot apical meristem, which also contains a stem cell niche. Interestingly, organ outgrowth has been proposed to generate compression in the saddle-shaped organ-meristem boundary domain. Yet whether such growth-induced mechanical stress affects chromatin in plant tissues is unknown. Here, by imaging the nuclear envelope in vivo over time and quantifying nucleus deformation, we demonstrate the presence of active nuclear compression in that domain. We developed a quantitative pipeline amenable to identifying a subset of very deformed nuclei deep in the boundary and in which nuclei become gradually narrower and more elongated as the cell contracts transversely. In this domain, we find that the number of chromocenters is reduced, as shown by chromatin staining and labeling, and that the expression of linker histone H1.3 is induced. As further evidence of the role of forces on chromatin changes, artificial compression with a MicroVice could induce the ectopic expression of H1.3 in the rest of the meristem. Furthermore, while the methylation status of chromatin was correlated with nucleus deformation at the meristem boundary, such correlation was lost in the

Indexed as

ArabidopsisChromatinDNA MethylationGene Expression Regulation, PlantHistonesImage Processing, Computer-AssistedMeristemNuclear EnvelopePlant CellsPlants, Genetically ModifiedPlant ShootsChromatinHistoneschromatinmechanical forcesnucleusorganogenesisplant

Identifiers

PMID33608459
PMCPMC7923354
OpenAlexW3129930242

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.