Evidence map›Paper›PMID 33606881›Full record

ArticleJournal of experimental botany2021

Dynamic histone acetylation in floral volatile synthesis and emission in petunia flowers.

Ryan M Patrick, Xing-Qi Huang, Natalia Dudareva, Ying Li

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
11.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  11. Review
  12. Genome-Wide Identification of PetuniaInternational journal of molecular sciences · 2022
    Article
  13. ODORANT1 targets multiple metabolic networks in petunia flowers.The Plant journal : for cell and molecular biology · 2022
    Article
  14. Review
  15. Headspace Volatiles and Endogenous Extracts ofMolecules (Basel, Switzerland) · 2021
    Article
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ryan M PatrickDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907,USA.
Xing-Qi HuangPurdue Center for Plant Biology, Purdue University, West Lafayette, IN 47907,USA.
Natalia DudarevaDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907,USA.
Ying LiDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907,USA.ORCID 0000-0002-5258-7355
Purdue University West Lafayette · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biosynthesis of secondary metabolites relies on primary metabolic pathways to provide precursors, energy, and cofactors, thus requiring coordinated regulation of primary and secondary metabolic networks. However, to date, it remains largely unknown how this coordination is achieved. Using Petunia hybrida flowers, which emit high levels of phenylpropanoid/benzenoid volatile organic compounds (VOCs), we uncovered genome-wide dynamic deposition of histone H3 lysine 9 acetylation (H3K9ac) during anthesis as an underlying mechanism to coordinate primary and secondary metabolic networks. The observed epigenome reprogramming is accompanied by transcriptional activation at gene loci involved in primary metabolic pathways that provide precursor phenylalanine, as well as secondary metabolic pathways to produce volatile compounds. We also observed transcriptional repression among genes involved in alternative phenylpropanoid branches that compete for metabolic precursors. We show that GNAT family histone acetyltransferase(s) (HATs) are required for the expression of genes involved in VOC biosynthesis and emission, by using chemical inhibitors of HATs, and by knocking down a specific HAT gene, ELP3, through transient RNAi. Together, our study supports that regulatory mechanisms at chromatin level may play an essential role in activating primary and secondary metabolic pathways to regulate VOC synthesis in petunia flowers.

Indexed as

PetuniaVolatile Organic CompoundsAcetylationFlowersGene Expression Regulation, PlantHistonesPlant ProteinsHistonesPlant ProteinsVolatile Organic CompoundsEpigenomefloral volatilehistone acetylationorganic compoundssecondary metabolites

Identifiers

PMID33606881
PMCPMC8096599
OpenAlexW3130556053

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.