Evidence map›Paper›PMID 33605077›Full record

ArticleThe plant genome2021

Identification and assessment of alleles in the promoter of the Cyc-B gene that modulate levels of β-carotene in ripe tomato fruit.

Caleb J Orchard, Jessica L Cooperstone, Elisabet Gas-Pascual, Marcela C Andrade, Gabriel Abud, Steven J Schwartz, David M Francis

Open access · goldAbstract read
In one paragraph

Article in The plant genome, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 13 citations in OpenAlex.

  1. Plant direct · 2022
    Article
  2. NovelFrontiers in plant science · 2022
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Caleb J OrchardDepartment of Horticulture and Crop Science, The Ohio State University, OARDC, 1680 Madison Ave., Wooster, OH, 44691, USA.
Jessica L CooperstoneDepartment of Horticulture and Crop Science, The Ohio State University, OARDC, 1680 Madison Ave., Wooster, OH, 44691, USA.ORCID 0000-0001-7920-0088
Elisabet Gas-PascualDepartment of Horticulture and Crop Science, The Ohio State University, OARDC, 1680 Madison Ave., Wooster, OH, 44691, USA.
Marcela C AndradeDeparment of Biology, Universidade Federal de Lavras, Campus Universitário, Lavras, Minas Gerais, 37200-000, Brazil.
Gabriel AbudDepartment of Horticulture and Crop Science, The Ohio State University, OARDC, 1680 Madison Ave., Wooster, OH, 44691, USA.
Steven J SchwartzDepartment of Food Science and Technology, The Ohio State University, 1739 N. High St., Columbus, OH, 43210, USA.
David M FrancisDepartment of Horticulture and Crop Science, The Ohio State University, OARDC, 1680 Madison Ave., Wooster, OH, 44691, USA.ORCID 0000-0003-2016-1357
The Ohio State University · USUniversidade Federal de Lavras · BRUniversity of Georgia · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Jennifer A. Woyach · 1985 to 2026
$132.3M
NCI NIH HHS P30 CA016058
6 · The paper itself

Abstract

Novel diversity may be mined from databases and de novo sequencing, but functional characterization remains a limiting step to identifying new alleles. Classical breeding approaches augmented by marker-assisted selection offer a means to rapidly assess the function of new variation in coding or regulatory regions to modulate traits. We used the Cyc-B gene (B) of tomato (Solanum lycopersicum L.) for a proof of concept because of its role in the production of β-carotene, a provitamin A carotenoid with importance to human nutrition. We measured carotenoid content in vintage and contemporary varieties and the profiles had a range of β-carotene from 0.2 to 4.06 mg 100 g

Indexed as

Solanum lycopersicumAllelesbeta CaroteneFruitPhylogenyPlant Breedingbeta Carotene

Identifiers

PMID33605077
PMCPMC12807180
OpenAlexW3130115479

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.