Evidence map›Paper›PMID 33605056›Full record

ArticleEMBO reports2021

H4K20me1 and H3K27me3 are concurrently loaded onto the inactive X chromosome but dispensable for inducing gene silencing.

Sjoerd J D Tjalsma, Mayako Hori, Yuko Sato, Aurelie Bousard, Akito Ohi, Ana Cláudia Raposo, Julia Roensch, Agnes Le Saux, Jumpei Nogami, Kazumitsu Maehara and 9 more

Abstract read
In one paragraph

Article in EMBO reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Article
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  7. Article
  8. Nuclear Dynamics and Its Timing Regulation Revealed by Live-Cell Imaging.Advances in experimental medicine and biology · 2026
    Review
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  11. Article
  12. Article
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  14. Article
  15. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Sjoerd J D TjalsmaMammalian Developmental Epigenetics Group, Institut Curie, CNRS UMR3215, INSERM U934, PSL University, Paris, France.
Mayako HoriGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan.
Yuko SatoGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0002-7805-9171
Aurelie BousardMammalian Developmental Epigenetics Group, Institut Curie, CNRS UMR3215, INSERM U934, PSL University, Paris, France.
Akito OhiGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan.
Ana Cláudia RaposoFaculdade de Medicina, Instituto de Medicina Molecular, João Lobo Antunes, Universidade de Lisboa, Lisboa, Portugal.
Julia RoenschMammalian Developmental Epigenetics Group, Institut Curie, CNRS UMR3215, INSERM U934, PSL University, Paris, France.
Agnes Le SauxMammalian Developmental Epigenetics Group, Institut Curie, CNRS UMR3215, INSERM U934, PSL University, Paris, France.
Jumpei NogamiDivision of Transcriptomics, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.
Kazumitsu MaeharaDivision of Transcriptomics, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.ORCID 0000-0002-2933-5176
Tomoya KujiraiInstitute for Quantitative Biosciences, The University of Tokyo, Tokyo, Japan.
Tetsuya HandaCell Biology Center, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0001-7707-0195
Sandra Bagés-ArnalThe Novo Nordisk Foundation Center for Stem Cell Biology, Copenhagen, Denmark.
Yasuyuki OhkawaDivision of Transcriptomics, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.ORCID 0000-0001-6440-9954
Hitoshi KurumizakaInstitute for Quantitative Biosciences, The University of Tokyo, Tokyo, Japan.
Simão Teixeira da RochaFaculdade de Medicina, Instituto de Medicina Molecular, João Lobo Antunes, Universidade de Lisboa, Lisboa, Portugal.ORCID 0000-0002-9683-7942
Jan J ŻyliczMammalian Developmental Epigenetics Group, Institut Curie, CNRS UMR3215, INSERM U934, PSL University, Paris, France.ORCID 0000-0001-9622-5658
Hiroshi KimuraGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0003-0854-083X
Edith HeardEMBL Heidelberg, Heidelberg, Germany.ORCID 0000-0001-8052-7117

Funding

European Research Council ERC-ADG-2014 671027Wellcome TrustWellcome Trust 201369/Z/16/Z
6 · The paper itself

Abstract

During X chromosome inactivation (XCI), in female placental mammals, gene silencing is initiated by the Xist long non-coding RNA. Xist accumulation at the X leads to enrichment of specific chromatin marks, including PRC2-dependent H3K27me3 and SETD8-dependent H4K20me1. However, the dynamics of this process in relation to Xist RNA accumulation remains unknown as is the involvement of H4K20me1 in initiating gene silencing. To follow XCI dynamics in living cells, we developed a genetically encoded, H3K27me3-specific intracellular antibody or H3K27me3-mintbody. By combining live-cell imaging of H3K27me3, H4K20me1, the X chromosome and Xist RNA, with ChIP-seq analysis we uncover concurrent accumulation of both marks during XCI, albeit with distinct genomic distributions. Furthermore, using a Xist B and C repeat mutant, which still shows gene silencing on the X but not H3K27me3 deposition, we also find a complete lack of H4K20me1 enrichment. This demonstrates that H4K20me1 is dispensable for the initiation of gene silencing, although it may have a role in the chromatin compaction that characterises facultative heterochromatin.

Indexed as

HistonesRNA, Long NoncodingAnimalsFemaleGene SilencingPlacentaPregnancyX ChromosomeX Chromosome InactivationHistonesRNA, Long Noncodingembryonic stem cellsH4K20me1heterochromatinpolycombX inactivation

Identifiers

PMID33605056
PMCPMC7926250

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.