Evidence map›Paper›PMID 33602817›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

The Srs2 helicase dampens DNA damage checkpoint by recycling RPA from chromatin.

Nalini Dhingra, Sahiti Kuppa, Lei Wei, Nilisha Pokhrel, Silva Baburyan, Xiangzhou Meng, Edwin Antony, Xiaolan Zhao

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  10. A DNA damage-induced phosphorylation circuit enhances Mec1Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Cryo-EM structure of DNA-bound Smc5/6 reveals DNA clamping enabled by multi-subunit conformational changes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Human HELB is a processive motor protein that catalyzes RPA clearance from single-stranded DNA.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Rad54 and Rdh54 prevent Srs2-mediated disruption of Rad51 presynaptic filaments.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. DNA damage checkpoint execution and the rules of its disengagement.Frontiers in cell and developmental biology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Nalini DhingraMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Sahiti KuppaDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104.ORCID 0000-0003-2601-6636
Lei WeiMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Nilisha PokhrelDepartment of Biological Sciences, Marquette University, Milwaukee, WI 53201.ORCID 0000-0002-2957-4046
Silva BaburyanDepartment of Biological Sciences, City University of New York Hunter College, New York, NY 10065.ORCID 0000-0001-9704-5042
Xiangzhou MengMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065.
Edwin AntonyDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104.ORCID 0000-0002-1888-054X
Xiaolan ZhaoMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065; zhaox1@mskcc.org.ORCID 0000-0002-8302-6905
Memorial Sloan Kettering Cancer Center · USSaint Louis University · USCity University of New York · USMarquette University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
The Rtt107 interactome structures and functionsR01GM080670 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI ZHAO, XIAOLAN · 2007 to 2021
$4.5M
Regulation of Replication and Recombination IntermediatesR01GM131058 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI ZHAO, XIAOLAN · 2019 to 2022
$1.6M
Supplement Request for a FluorometerR01GM133967 · NIGMS · SAINT LOUIS UNIVERSITY · PI ANTONY, EDWIN · 2019 to 2023
$1.5M
Mechanisms of DNA hand-off during lesion repair in BER and NER supplementR01GM130746 · NIGMS · SAINT LOUIS UNIVERSITY · PI ANTONY, EDWIN · 2019 to 2022
$1.4M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R01 GM080670NIGMS NIH HHS R01 GM130746NIGMS NIH HHS R01 GM131058NIGMS NIH HHS R01 GM133967
6 · The paper itself

Abstract

The DNA damage checkpoint induces many cellular changes to cope with genotoxic stress. However, persistent checkpoint signaling can be detrimental to growth partly due to blockage of cell cycle resumption. Checkpoint dampening is essential to counter such harmful effects, but its mechanisms remain to be understood. Here, we show that the DNA helicase Srs2 removes a key checkpoint sensor complex, RPA, from chromatin to down-regulate checkpoint signaling in budding yeast. The Srs2 and RPA antagonism is supported by their numerous suppressive genetic interactions. Importantly, moderate reduction of RPA binding to single-strand DNA (ssDNA) rescues hypercheckpoint signaling caused by the loss of Srs2 or its helicase activity. This rescue correlates with a reduction in the accumulated RPA and the associated checkpoint kinase on chromatin in

Indexed as

DNA DamageChromatinDNA HelicasesDNA RepairDNA, Single-StrandedReplication Protein ASaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromatinDNA HelicasesDNA, Single-StrandedReplication Protein ARFA1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSRS2 protein, S cerevisiaecheckpoint dampeninggenotoxic stressrecombinational repairRPA regulationSrs2

Identifiers

PMID33602817
PMCPMC7923681
OpenAlexW3130496509

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.