Evidence map›Paper›PMID 33599911›Full record

ArticleImmunologic research2021

Exploring genetic defects in adults who were clinically diagnosed as severe combined immune deficiency during infancy.

Ido Somekh, Atar Lev, Ortal Barel, Yu Nee Lee, Ayal Hendel, Amos J Simon, Raz Somech

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Immunologic research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Trends in the Epidemiology ofJournal of fungi (Basel, Switzerland) · 2023
    Review
  4. Food chemistry: X · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ido SomekhDepartment of Pediatric Hematology Oncology, Schneider Children's Medical Center of Israel, Petach Tikva, Israel.
Atar LevSackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Ortal BarelThe Genomic Unit, Sheba Cancer Research Center, Sheba Medical Center, Tel Hashomer, Israel.
Yu Nee LeeSackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Ayal HendelThe Mina and Everard Goodman Faculty of Life Sciences, Advanced Materials and Nanotechnology Institute, Bar-Ilan University, Ramat-Gan, Israel.
Amos J SimonSackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Raz SomechSackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel. raz.somech@sheba.health.gov.il.
Sheba Medical Center · ILTel Aviv University · ILBar-Ilan University · ILSchneider Children's Medical Center · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic diagnostic tools including whole-exome sequencing (WES) have advanced our understanding in human diseases and become common practice in diagnosing patients with suspected primary immune deficiencies. Establishing a genetic diagnosis is of paramount importance for tailoring adequate therapeutic regimens, including identifying the need for hematopoietic stem cell transplantation (HSCT) and genetic-based therapies. Here, we genetically studied two adult patients who were clinically diagnosed during infancy with severe combined immune deficiency (SCID). Two unrelated patients, both of consanguineous kindred, underwent WES in adulthood, 2 decades after their initial clinical manifestations. Upon clinical presentation, immunological workup was performed, which led to a diagnosis of SCID. The patients presented during infancy with failure to thrive, generalized erythematous rash, and recurrent gastrointestinal and respiratory tract infections, including episodes of Pneumocystis pneumonia infection and Candida albicans fungemia. Hypogammaglobulinemia and T-cell lymphopenia were detected. Both patients were treated with a 10/10 HLA matched sibling donor unconditioned HSCT. Retrospective genetic workup revealed homozygous bi-allelic mutations in IL7RA in one patient and in RAG2 in the other. Our study exemplifies the impact of retrospectively establishing a genetic diagnosis. Pinpointing the genetic cause raises several issues including optimized surveillance and treatment, understanding disease mechanisms and outcomes, future family planning, and social and psychological considerations.

Indexed as

AdultDNA-Binding ProteinsFemaleHematopoietic Stem Cell TransplantationHumansInfantMaleMutationNuclear ProteinsReceptors, Antigen, T-CellReceptors, Interleukin-17Severe Combined ImmunodeficiencyYoung AdultDNA-Binding ProteinsIL17RA protein, humanNuclear ProteinsRAG2 protein, humanReceptors, Antigen, T-CellReceptors, Interleukin-17IL7RAIL7RαPIDsPrimary immunodeficiencyRAG2RetrospectSCIDSevere combined immunodeficiencyWES

Identifiers

PMID33599911
OpenAlexW3132661411

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.