Evidence map›Paper›PMID 33599106›Full record

ArticleInternational journal for numerical methods in biomedical engineering2021

Enabling forward uncertainty quantification and sensitivity analysis in cardiac electrophysiology by reduced order modeling and machine learning.

Stefano Pagani, Andrea Manzoni

Abstract read
In one paragraph

Article in International journal for numerical methods in biomedical engineering, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Branched Latent Neural Maps.Computer methods in applied mechanics and engineering · 2024
    Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Stefano PaganiMOX, Dipartimento di Matematica, Politecnico di Milano, Milan, Italy.
Andrea ManzoniMOX, Dipartimento di Matematica, Politecnico di Milano, Milan, Italy.ORCID 0000-0001-8277-2802

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a new, computationally efficient framework to perform forward uncertainty quantification (UQ) in cardiac electrophysiology. We consider the monodomain model to describe the electrical activity in the cardiac tissue, coupled with the Aliev-Panfilov model to characterize the ionic activity through the cell membrane. We address a complete forward UQ pipeline, including both: (i) a variance-based global sensitivity analysis for the selection of the most relevant input parameters, and (ii) a way to perform uncertainty propagation to investigate the impact of intra-subject variability on outputs of interest depending on the cardiac potential. Both tasks exploit stochastic sampling techniques, thus implying overwhelming computational costs because of the huge amount of queries to the high-fidelity, full-order computational model obtained by approximating the coupled monodomain/Aliev-Panfilov system through the finite element method. To mitigate this computational burden, we replace the full-order model with computationally inexpensive projection-based reduced-order models (ROMs) aimed at reducing the state-space dimensionality. Resulting approximation errors on the outputs of interest are finally taken into account through artificial neural network (ANN)-based models, enhancing the accuracy of the whole UQ pipeline. Numerical results show that the proposed physics-based ROMs outperform regression-based emulators relying on ANNs built with the same amount of training data, in terms of both numerical accuracy and overall computational efficiency.

Indexed as

Electrophysiologic Techniques, CardiacHeartMachine LearningNeural Networks, ComputerUncertaintyartificial neural network regressioncardiac electrophysiologyreduced basis methodreduced order modelingsensitivity analysisuncertainty quantification

Identifiers

PMID33599106
PMCPMC8244126

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.