Evidence map›Paper›PMID 33598859›Full record

ArticleJournal of applied genetics2021

Genome-wide identification and expression analysis of the MADS-box transcription factor family in Camellia sinensis.

Zai-Bao Zhang, Yuan-Jin Jin, Hou-Hong Wan, Lin Cheng, Zhi-Guo Feng

Abstract read
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In one paragraph

Article in Journal of applied genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Molecular regulation of immunity in tea plants.Molecular biology reports · 2023
    Review
  8. Gene Structural Specificity and Expression ofInternational journal of molecular sciences · 2023
    Article
  9. Article
  10. Article
  11. Identification and expression analysis of the MADS-box genes of Kentucky bluegrass during inflorescence development.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zai-Bao ZhangKey Laboratory of Tea Plant Biology in Henan Province, Xinyang, Henan, China. zaibaozhang79@163.com.
Yuan-Jin JinInstitute for Conservation and Utilization of Agro-bioresources in Dabie Mountains, Xinyang Normal University, Xinyang, Henan, China.
Hou-Hong WanInstitute for Conservation and Utilization of Agro-bioresources in Dabie Mountains, Xinyang Normal University, Xinyang, Henan, China.
Lin ChengInstitute for Conservation and Utilization of Agro-bioresources in Dabie Mountains, Xinyang Normal University, Xinyang, Henan, China.
Zhi-Guo FengSchool of Science, Qiongtai Normal University, Haikou, Hainan, China.
Xinyang Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The MADS-box genes are an important class of transcription factors and play critical roles in flower development. However, the functions of these genes in the economically important drinking plant, Camellia sinensis, are still not reported. Here, an evolutionary analysis of tea MADS-box genes was performed at whole genome level. A total of 83 MADS-box genes were identified in tea, and their gene structures and expression patterns were further analyzed. The tea MADS-box genes were classified into Mα (26), Mβ (12), Mγ (9), MIKC* (7), and MIKCC (29) clade according to their phylogenetic relationship with Arabidopsis thaliana. Several cis-elements were identified in the promoter regions of the CsMADS genes that are important in regulating growth, development, light responses, and the response to several stresses. Most CsMADS genes display clear different expression patterns in different organs and different species of tea plant. The expression of CsMADS genes can be regulated by abiotic stresses and phytohormone treatment. Our results lay the foundation for future research on the function of CsMADS genes and beneficial for improving tea agricultural traits in the future.

Indexed as

Camellia sinensisMADS Domain ProteinsPlant ProteinsGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyMADS Domain ProteinsPlant ProteinsAbiotic stressCamellia sinensisEvolutionary relationshipMADS-box proteinsPhylogenetic tree

Identifiers

PMID33598859
OpenAlexW3131617248

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.