Evidence map›Paper›PMID 33598641›Full record

ArticleiScience2021

Morphogenesis and oxygen dynamics in phototrophic biofilms growing across a gradient of hydraulic conditions.

Anna Depetris, Hannes Peter, Ankur Deep Bordoloi, Hippolyte Bernard, Amin Niayifar, Michael Kühl, Pietro de Anna, Tom Jan Battin

Open access · goldAbstract read
In one paragraph

Article in iScience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Anna DepetrisStream Biofilm and Ecosystem Research Laboratory, School of Architecture, Civil and Environmental Engineering, École polytechnique fédérale de Lausanne, 1015 Lausanne, Switzerland.
Hannes PeterStream Biofilm and Ecosystem Research Laboratory, School of Architecture, Civil and Environmental Engineering, École polytechnique fédérale de Lausanne, 1015 Lausanne, Switzerland.
Ankur Deep BordoloiInstitute of Earth Sciences, University of Lausanne, 1015 Lausanne, Switzerland.
Hippolyte BernardStream Biofilm and Ecosystem Research Laboratory, School of Architecture, Civil and Environmental Engineering, École polytechnique fédérale de Lausanne, 1015 Lausanne, Switzerland.
Amin NiayifarStream Biofilm and Ecosystem Research Laboratory, School of Architecture, Civil and Environmental Engineering, École polytechnique fédérale de Lausanne, 1015 Lausanne, Switzerland.
Michael KühlMarine Biological Section, Department of Biology, University of Copenhagen, Strandpromenaden 5, 3000 Helsingør, Denmark.
Pietro de AnnaInstitute of Earth Sciences, University of Lausanne, 1015 Lausanne, Switzerland.
Tom Jan BattinStream Biofilm and Ecosystem Research Laboratory, School of Architecture, Civil and Environmental Engineering, École polytechnique fédérale de Lausanne, 1015 Lausanne, Switzerland.
École Polytechnique Fédérale de Lausanne · CHUniversity of Lausanne · CHUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilms are surface-attached and matrix-enclosed microbial communities that dominate microbial life in numerous ecosystems. Using flumes and automated optical coherence tomography, we studied the morphogenesis of phototrophic biofilms along a gradient of hydraulic conditions. Compact and coalescent biofilms formed under elevated bed shear stress, whereas protruding clusters separated by troughs formed under reduced shear stress. This morphological differentiation did not linearly follow the hydraulic gradient, but a break point emerged around a shear stress of ~0.08 Pa. While community composition did not differ between high and low shear environments, our results suggest that the morphological differentiation was linked to biomass displacement and reciprocal interactions between the biofilm structure and hydraulics. Mapping oxygen concentrations within and around biofilm structures, we provide empirical evidence for biofilm-induced alterations of oxygen mass transfer. Our findings suggest that architectural plasticity, efficient mass transfer, and resistance to shear stress contribute to the success of phototrophic biofilms.

Indexed as

biophysicsMicrobiofilms

Identifiers

PMID33598641
PMCPMC7868926
OpenAlexW3123885452

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.