Evidence map›Paper›PMID 33598107›Full record

ArticleComputational and structural biotechnology journal2021

Structure-based peptide design targeting intrinsically disordered proteins: Novel histone H4 and H2A peptidic inhibitors.

Kanin Wichapong, Carlos Silvestre-Roig, Quinte Braster, Ariane Schumski, Oliver Soehnlein, Gerry A F Nicolaes

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
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  5. Structural bioinformatics for rational drug design.Research and practice in thrombosis and haemostasis · 2025
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. The role of extracellular histones in COVID-19.Journal of internal medicine · 2023
    Review
  13. Article
  14. The IRAK-M death domain: a tale of three surfaces.Frontiers in molecular biosciences · 2023
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Identification of novel SARS-CoV-2 RNA dependent RNA polymerase (RdRp) inhibitors: FromComputational and structural biotechnology journal · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Kanin WichapongDepartment of Biochemistry, Cardiovascular Research Institute Maastricht (CARIM), Maastricht University, Maastricht, the Netherlands.
Carlos Silvestre-RoigInstitute for Cardiovascular Prevention (IPEK), LMU Munich Hospital, Munich, Germany.
Quinte BrasterInstitute for Cardiovascular Prevention (IPEK), LMU Munich Hospital, Munich, Germany.
Ariane SchumskiInstitute for Cardiovascular Prevention (IPEK), LMU Munich Hospital, Munich, Germany.
Oliver SoehnleinInstitute for Cardiovascular Prevention (IPEK), LMU Munich Hospital, Munich, Germany.
Gerry A F NicolaesDepartment of Biochemistry, Cardiovascular Research Institute Maastricht (CARIM), Maastricht University, Maastricht, the Netherlands.
German Centre for Cardiovascular Research · DEMaastricht University · NLKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A growing body of research has demonstrated that targeting intrinsically disordered proteins (IDPs) and intrinsically disordered protein regions (IDPRs) is feasible and represents a new trending strategy in drug discovery. However, the number of inhibitors targeting IDPs/IDPRs is increasing slowly due to limitations of the methods that can be used to accelerate the discovery process. We have applied structure-based methods to successfully develop the first peptidic inhibitor (

Indexed as

aMD, accelerated molecular dynamicsARDS, acute respiratory distress syndromeBFE, binding free energyBRCA-1, breast cancer type1 susceptibility proteinCCL5, chemokine ligand 5CHIP, cyclical histone H2A interference peptideComputer-aided molecular design (CAMD)DC, decompositionDisordered proteinsH2A, histone H2AH2B, histone H2BH3, histone H3H4, histone H4HIPe, histone inhibitory peptideHistonesHNP1, human neutrophil peptide 1IDPRs, intrinsically disordered protein regionsIDPs, intrinsically disordered proteinsMD, molecular dynamicsMM/GBSA, molecular mechanics/generalised born surface areaNETs, neutrophil extracellular trapsNeutrophil extracellular traps (NETs)p53, tumor protein 53PDB, protein data bankPeptidesPPIs, protein-protein interactionsProtein-protein interactions (PPIs)PTP1B, protein tyrosine phosphatase 1BSMCs, smooth muscle cells

Identifiers

PMID33598107
PMCPMC7856395
OpenAlexW3125356129

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.