Evidence map›Paper›PMID 33597549›Full record

ArticleNature communications2021

Telomeres reforged with non-telomeric sequences in mouse embryonic stem cells.

Chuna Kim, Sanghyun Sung, Jong-Seo Kim, Hyunji Lee, Yoonseok Jung, Sanghee Shin, Eunkyeong Kim, Jenny J Seo, Jun Kim, Daeun Kim and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Chuna Kim *Department of Biological Sciences, Seoul National University, Seoul, Korea.
Sanghyun Sung *Department of Biological Sciences, Seoul National University, Seoul, Korea.
Jong-Seo Kim *Department of Biological Sciences, Seoul National University, Seoul, Korea.ORCID 0000-0002-8909-8440
Hyunji LeeDepartment of Biological Sciences, Seoul National University, Seoul, Korea.
Yoonseok JungCenter for RNA Research, Institute for Basic Science, Seoul, Korea.
Sanghee ShinDepartment of Biological Sciences, Seoul National University, Seoul, Korea.
Eunkyeong KimDepartment of Biological Sciences, Seoul National University, Seoul, Korea.
Jenny J SeoDepartment of Biological Sciences, Seoul National University, Seoul, Korea.
Jun KimDepartment of Biological Sciences, Seoul National University, Seoul, Korea.ORCID 0000-0001-9753-4778
Daeun KimDepartment of Biological Sciences, Ajou University, Suwon, Korea.
Hiroyuki NiidaDepartment of Molecular Biology, Hamamatsu University School of Medicine, Hamamatsu, Shizuoka, Japan.
V Narry KimDepartment of Biological Sciences, Seoul National University, Seoul, Korea.ORCID 0000-0002-3213-4965
Daechan ParkDepartment of Biological Sciences, Ajou University, Suwon, Korea. dpark@ajou.ac.kr.
Junho LeeDepartment of Biological Sciences, Seoul National University, Seoul, Korea. elegans@snu.ac.kr.
Seoul National University · KRAjou University · KRHamamatsu University School of Medicine · JPInstitute for Basic Science · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Telomeres are part of a highly refined system for maintaining the stability of linear chromosomes. Most telomeres rely on simple repetitive sequences and telomerase enzymes to protect chromosomal ends; however, in some species or telomerase-defective situations, an alternative lengthening of telomeres (ALT) mechanism is used. ALT mainly utilises recombination-based replication mechanisms and the constituents of ALT-based telomeres vary depending on models. Here we show that mouse telomeres can exploit non-telomeric, unique sequences in addition to telomeric repeats. We establish that a specific subtelomeric element, the mouse template for ALT (mTALT), is used for repairing telomeric DNA damage as well as for composing portions of telomeres in ALT-dependent mouse embryonic stem cells. Epigenomic and proteomic analyses before and after ALT activation reveal a high level of non-coding mTALT transcripts despite the heterochromatic nature of mTALT-based telomeres. After ALT activation, the increased HMGN1, a non-histone chromosomal protein, contributes to the maintenance of telomere stability by regulating telomeric transcription. These findings provide a molecular basis to study the evolution of new structures in telomeres.

Indexed as

AnimalsDNA-Binding ProteinsEpigenomicsHEK293 CellsHumansMiceMice, 129 StrainMice, Inbred C57BLMouse Embryonic Stem CellsProteomicsRepetitive Sequences, Nucleic AcidSequence Analysis, RNASingle-Cell AnalysisTelomeraseTelomereTelomere HomeostasisDmrt2 protein, mouseDNA-Binding ProteinsTelomeraseTranscription Factors

Identifiers

PMID33597549
PMCPMC7889907
OpenAlexW3132506821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.