Evidence map›Paper›PMID 33596997›Full record

ArticleGut pathogens2021

Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors.

Virinder Sarhadi, Binu Mathew, Arto Kokkola, Tiina Karla, Milja Tikkanen, Hilpi Rautelin, Leo Lahti, Pauli Puolakkainen, Sakari Knuutila

Open access · goldAbstract read
In one paragraph

Article in Gut pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  4. Revisiting multi-region 16S sequencing in gastric cancer.World journal of gastrointestinal oncology · 2026
    Article
  5. Longitudinal remodeling of gastric microbiota followingFrontiers in cellular and infection microbiology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Virinder SarhadiFaculty of Medicine, Department of Pathology, University of Helsinki, 00014, Helsinki, Finland.
Binu MathewDepartment of Computing, University of Turku, Turku, Finland.
Arto KokkolaThe HUCH Gastrointestinal Clinic, University Central Hospital of Helsinki, Helsinki, Finland.
Tiina KarlaThermo Fisher Scientific, Vantaa, Finland.
Milja TikkanenThermo Fisher Scientific, Vantaa, Finland.
Hilpi RautelinDepartment of Medical Sciences, Clinical Microbiology, Uppsala University, Uppsala, Sweden.
Leo LahtiDepartment of Computing, University of Turku, Turku, Finland.
Pauli PuolakkainenThe HUCH Gastrointestinal Clinic, University Central Hospital of Helsinki, Helsinki, Finland.
Sakari KnuutilaFaculty of Medicine, Department of Pathology, University of Helsinki, 00014, Helsinki, Finland. sakari.knuutila@helsinki.fi.ORCID http://orcid.org/0000-0001-5592-3839
Helsinki University Hospital · FIThermo Fisher Scientific (Finland) · FIUniversity of Helsinki · FIUniversity of Turku · FIUppsala University · SE

Funding

Academy of Finland 295741
6 · The paper itself

Abstract

backgroundGastric adenocarcinoma is associated with H. pylori infection and inflammation that can result in the dysbiosis of gastric microbiota. The association of intestinal microbiota with gastric adenocarcinoma subtypes or with gastric gastrointestinal stromal tumors (GIST) is however not well known. Therefore, we performed 16S rRNA gene sequencing on DNA isolated from stool samples of Finnish patients and controls to study differences in microbiota among different histological subtypes of gastric adenocarcinoma, gastric GIST and healthy controls.

resultsWe found that gut microbiota alpha diversity was lowest in diffuse adenocarcinoma patients, followed by intestinal type and GIST patients, although the differences were not significant compared to controls. Beta-diversity analysis however showed significant differences in microbiota composition for all subtypes compared to controls. Significantly higher abundance of Enterobacteriaceae was observed in both adenocarcinoma subtypes, whereas lower abundance of Bifidobacteriaceae was seen only in diffuse adenocarcinoma and of Oscillibacter in intestinal adenocarcinoma. Both GIST and adenocarcinoma patients had higher abundance of Enterobacteriaceae and lower abundance of Lactobacillaceae and Oscillibacter while lower abundance of Lachnoclostridium, Bifidobacterium, Parabacteroides and Barnesiella was seen only in the adenocarcinoma patients.

conclusionsOur analysis shows association of higher Enterobacteriaceae abundance with all types of gastric tumors. Therefore it could be potentially useful as a marker of gastric malignancies. Lower gut microbiota diversity might be indicative of poorly differentiated, invasive, advanced or aggressive tumors and could possibly be a prognostic marker for gastric tumors.

Indexed as

Diffuse gastric adenocarcinomaGISTGut microbiotaIntestinal gastric adenocarcinoma

Identifiers

PMID33596997
PMCPMC7888145
OpenAlexW3133285206

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.