Evidence map›Paper›PMID 33595649›Full record

ArticleThe journals of gerontology. Series A, Biological sciences and medical sciences2021

Creating and Validating a DNA Methylation-Based Proxy for Interleukin-6.

Anna J Stevenson, Danni A Gadd, Robert F Hillary, Daniel L McCartney, Archie Campbell, Rosie M Walker, Kathryn L Evans, Sarah E Harris, Tara L Spires-Jones, Allan F McRae and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The journals of gerontology. Series A, Biological sciences and medical sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 2 pooled it
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 2 syntheses or guidelines pooled it, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Anna J StevensonCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.ORCID 0000-0002-0435-3562
Danni A GaddCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
Robert F HillaryCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
Daniel L McCartneyCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
Archie CampbellCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.ORCID 0000-0003-0198-5078
Rosie M WalkerCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
Kathryn L EvansCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
Sarah E HarrisLothian Birth Cohorts, University of Edinburgh, UK.
Tara L Spires-JonesUK Dementia Research Institute, Edinburgh Medical School, University of Edinburgh, UK.ORCID 0000-0003-2530-0598
Allan F McRaeInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Australia.
Peter M VisscherInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Australia.
Andrew M McIntoshDivision of Psychiatry, University of Edinburgh, Royal Edinburgh Hospital, UK.
Ian J DearyLothian Birth Cohorts, University of Edinburgh, UK.
Riccardo E MarioniCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
University of Edinburgh · GBNHS Lothian · GBThe University of Queensland · AUUK Dementia Research Institute · GBRoyal Edinburgh Hospital · GB

Funding

Evaluating Longitudinal Changes in the Human Structural Connectome in Relation to Cognitive AgingR01AG054628 · NIA · UNIVERSITY OF TEXAS AT AUSTIN · PI TUCKER-DROB, ELLIOT MAX · 2017 to 2021
$2.7M
Alzheimer's SocietyBiotechnology and Biological Sciences Research CouncilChief Scientist Office CZD/16/6European Research CouncilMedical Research Council G0700704Medical Research Council MR/K026992/1Medical Research Council MR/M01311/1NIA NIH HHS R01 AG054628NIH HHS R01AG054628Wellcome TrustWellcome Trust 104036/Z/14/ZWellcome Trust 108890/Z/15/ZWellcome Trust 203771/Z/16/ZWellcome Trust 216767/Z/19/Z
6 · The paper itself

Abstract

backgroundStudies evaluating the relationship between chronic inflammation and cognitive functioning have produced heterogeneous results. A potential reason for this is the variability of inflammatory mediators which could lead to misclassifications of individuals' persisting levels of inflammation. DNA methylation (DNAm) has shown utility in indexing environmental exposures and could be leveraged to provide proxy signatures of chronic inflammation.

methodWe conducted an elastic net regression of interleukin-6 (IL-6) in a cohort of 875 older adults (Lothian Birth Cohort 1936; mean age: 70 years) to develop a DNAm-based predictor. The predictor was tested in an independent cohort (Generation Scotland; N = 7028 [417 with measured IL-6], mean age: 51 years).

resultsA weighted score from 35 CpG sites optimally predicted IL-6 in the independent test set (Generation Scotland; R2 = 4.4%, p = 2.1 × 10-5). In the independent test cohort, both measured IL-6 and the DNAm proxy increased with age (serum IL-6: n = 417, β = 0.02, SE = 0.004, p = 1.3 × 10-7; DNAm IL-6 score: N = 7028, β = 0.02, SE = 0.0009, p < 2 × 10-16). Serum IL-6 did not associate with cognitive ability (n = 417, β = -0.06, SE = 0.05, p = .19); however, an inverse association was identified between the DNAm score and cognitive functioning (N = 7028, β = -0.16, SE = 0.02, pFDR < 2 × 10-16).

conclusionsThese results suggest methylation-based predictors can be used as proxies for inflammatory markers, potentially allowing for further insight into the relationship between inflammation and pertinent health outcomes.

Indexed as

CognitionDNA MethylationInflammationInterleukin-6AgedCohort StudiesEpigenesis, GeneticHumansMiddle AgedInterleukin-6Cognitive abilityDNA methylationEpigeneticsInflammationInterleukin-6

Identifiers

PMID33595649
PMCPMC8599002
OpenAlexW3132892285

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.