Evidence map›Paper›PMID 33594068›Full record

ArticleNature communications2021

Auxin-mediated protein depletion for metabolic engineering in terpene-producing yeast.

Zeyu Lu, Bingyin Peng, Birgitta E Ebert, Geoff Dumsday, Claudia E Vickers

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. Metabolic engineering ofFrontiers in microbiology · 2026
    Article
  3. Biosynthesis of irregular monoterpene lavandulol inSynthetic and systems biotechnology · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Metabolic engineering: Tools and applications.Engineering microbiology · 2023
    Article
  10. Article
  11. Article
  12. EngineeringSynthetic and systems biotechnology · 2023
    Article
  13. Article
  14. Article
  15. Conditional protein degradation inFrontiers in bioengineering and biotechnology · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Autotrophic lactate production from HApplied microbiology and biotechnology · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Zeyu LuAustralian Institute for Bioengineering and Nanotechnology (AIBN), the University of Queensland, Brisbane, QLD, Australia.ORCID 0000-0001-6536-6407
Bingyin PengAustralian Institute for Bioengineering and Nanotechnology (AIBN), the University of Queensland, Brisbane, QLD, Australia. b.peng@uq.edu.au.
Birgitta E EbertAustralian Institute for Bioengineering and Nanotechnology (AIBN), the University of Queensland, Brisbane, QLD, Australia.
Geoff DumsdayCSIRO Manufacturing, Clayton, VIC, Australia.
Claudia E VickersAustralian Institute for Bioengineering and Nanotechnology (AIBN), the University of Queensland, Brisbane, QLD, Australia. claudia.vickers@csiro.au.ORCID 0000-0002-0792-050X
Commonwealth Scientific and Industrial Research Organisation · AUCSIRO Manufacturing · AUThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In metabolic engineering, loss-of-function experiments are used to understand and optimise metabolism. A conditional gene inactivation tool is required when gene deletion is lethal or detrimental to growth. Here, we exploit auxin-inducible protein degradation as a metabolic engineering approach in yeast. We demonstrate its effectiveness using terpenoid production. First, we target an essential prenyl-pyrophosphate metabolism protein, farnesyl pyrophosphate synthase (Erg20p). Degradation successfully redirects metabolic flux toward monoterpene (C10) production. Second, depleting hexokinase-2, a key protein in glucose signalling transduction, lifts glucose repression and boosts production of sesquiterpene (C15) nerolidol to 3.5 g L

Indexed as

Metabolic EngineeringBacterial ProteinsCell Cycle CheckpointsCoenzyme A LigasesGlucoseHexokinaseIndoleacetic AcidsLimoneneMetabolic Flux AnalysisPolyisoprenyl PhosphatesProteolysisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSesquiterpenesTerpenesBacterial ProteinsCoenzyme A Ligasesfarnesyl pyrophosphateGlucoseHexokinaseIndoleacetic AcidsLimonenemalonyl-CoA synthetasenerolidolPolyisoprenyl PhosphatesSaccharomyces cerevisiae ProteinsSesquiterpenesTerpenes

Identifiers

PMID33594068
PMCPMC7886869
OpenAlexW3132062292

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.