Evidence map›Paper›PMID 33593413›Full record

ArticleBiotechnology for biofuels2021

Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees.

Madhavi Latha Gandla, Niklas Mähler, Sacha Escamez, Tomas Skotare, Ogonna Obudulu, Linus Möller, Ilka N Abreu, Joakim Bygdell, Magnus Hertzberg, Torgeir R Hvidsten and 5 more

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Madhavi Latha GandlaDepartment of Chemistry, Umeå University, 901 87, Umeå, Sweden.
Niklas MählerUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87, Umeå, Sweden.
Sacha EscamezUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87, Umeå, Sweden.
Tomas SkotareDepartment of Chemistry, Umeå University, 901 87, Umeå, Sweden.
Ogonna ObuduluUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden.
Linus MöllerSweTree Technologies, PO Box 7981, 907 19, Umeå, Sweden.
Ilka N AbreuUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden.
Joakim BygdellDepartment of Chemistry, Umeå University, 901 87, Umeå, Sweden.
Magnus HertzbergSweTree Technologies, PO Box 7981, 907 19, Umeå, Sweden.
Torgeir R HvidstenUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87, Umeå, Sweden.
Thomas MoritzUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden.
Gunnar WingsleUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden.
Johan TryggDepartment of Chemistry, Umeå University, 901 87, Umeå, Sweden.
Hannele TuominenUmeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87, Umeå, Sweden. hannele.tuominen@slu.se.ORCID http://orcid.org/0000-0002-4949-3702
Leif J JönssonDepartment of Chemistry, Umeå University, 901 87, Umeå, Sweden.
Swedish University of Agricultural Sciences · SEUmeå University · SEUmeå Plant Science Centre · SESweTree Technologies (Sweden) · SE

Funding

Swedish Foundation for Strategic Research RBP14-0011Swedish Research Council FORMAS 232-2009-1698the KAW Foundation 2016-0341the strategic research environment Bio4Energy, and the Swedish Energy Agency P47516-1the Swedish Governmental Agency for Innovation Systems Vinnova 2015-02290
6 · The paper itself

Abstract

backgroundBioconversion of wood into bioproducts and biofuels is hindered by the recalcitrance of woody raw material to bioprocesses such as enzymatic saccharification. Targeted modification of the chemical composition of the feedstock can improve saccharification but this gain is often abrogated by concomitant reduction in tree growth.

resultsIn this study, we report on transgenic hybrid aspen (Populus tremula × tremuloides) lines that showed potential to increase biomass production both in the greenhouse and after 5 years of growth in the field. The transgenic lines carried an overexpression construct for Populus tremula × tremuloides vesicle-associated membrane protein (VAMP)-associated protein PttVAP27-17 that was selected from a gene-mining program for novel regulators of wood formation. Analytical-scale enzymatic saccharification without any pretreatment revealed for all greenhouse-grown transgenic lines, compared to the wild type, a 20-44% increase in the glucose yield per dry weight after enzymatic saccharification, even though it was statistically significant only for one line. The glucose yield after enzymatic saccharification with a prior hydrothermal pretreatment step with sulfuric acid was not increased in the greenhouse-grown transgenic trees on a dry-weight basis, but increased by 26-50% when calculated on a whole biomass basis in comparison to the wild-type control. Tendencies to increased glucose yields by up to 24% were present on a whole tree biomass basis after acidic pretreatment and enzymatic saccharification also in the transgenic trees grown for 5 years on the field when compared to the wild-type control.

conclusionsThe results demonstrate the usefulness of gene-mining programs to identify novel genes with the potential to improve biofuel production in tree biotechnology programs. Furthermore, multi-omic analyses, including transcriptomic, proteomic and metabolomic analyses, performed here provide a toolbox for future studies on the function of VAP27 proteins in plants.

Indexed as

BioprocessingGrowthMetabolomicsPopulusProteomicsTranscriptomicsVAMPVAMP-associated proteinVAP27Vesicle-associated membrane protein

Identifiers

PMID33593413
PMCPMC7885582
OpenAlexW3131971052

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.