Evidence map›Paper›PMID 33591955›Full record

ArticleJCI insight2021

Proteomic profiling reveals biomarkers and pathways in type 2 diabetes risk.

Debby Ngo, Mark D Benson, Jonathan Z Long, Zsu-Zsu Chen, Ruiqi Wang, Anjali K Nath, Michelle J Keyes, Dongxiao Shen, Sumita Sinha, Eric Kuhn and 16 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 2 pooled it
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 2 syntheses or guidelines pooled it, 80 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Distinct Plasma Proteomic Signatures Distinguish MASLD From Non-Steatotic Individuals but Not From MetALD.Liver international : official journal of the International Association for the Study of the Liver · 2026
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  14. Plasma Proteomics Reveals Dysregulated Pathways Across the SpectrumCirculation. Genomic and precision medicine · 2025
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 9 institutions in 3 countries.

Debby NgoCardiovascular Institute.
Mark D BensonCardiovascular Institute.
Jonathan Z LongDepartment of Pathology, Stanford University, Stanford, California, USA.
Zsu-Zsu ChenCardiovascular Institute.
Ruiqi WangDepartment of Biostatistics, Boston University School of Public Health, Boston, Massachusetts, USA.
Anjali K NathCardiovascular Institute.
Michelle J KeyesCardiovascular Institute.
Dongxiao ShenCardiovascular Institute.
Sumita SinhaCardiovascular Institute.
Eric KuhnBroad Institute of Harvard and MIT, Cambridge, Massachusetts, USA.
Jordan E MorningstarCardiovascular Institute.
Xu ShiCardiovascular Institute.
Bennet D PetersonCardiovascular Institute.
Christopher ChanCardiovascular Institute.
Daniel H KatzCardiovascular Institute.
Usman A TahirCardiovascular Institute.
Laurie A FarrellCardiovascular Institute.
Olle MelanderDepartment of Cardiology, Clinical Sciences, Lund University and Skåne University Hospital, Lund, Sweden.
Jonathan D MosleyDepartments of Medicine and Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Steven A CarrBroad Institute of Harvard and MIT, Cambridge, Massachusetts, USA.
Ramachandran S VasanDepartment of Medicine, Divisions of Preventive Medicine and Cardiology, Boston University School of Medicine, Boston, Massachusetts, USA.
Martin G LarsonDepartment of Biostatistics, Boston University School of Public Health, Boston, Massachusetts, USA.
J Gustav SmithDepartment of Cardiology, Clinical Sciences, Lund University and Skåne University Hospital, Lund, Sweden.
Thomas J WangDepartment of Medicine, University of Texas, Southwestern Medical Center, Dallas, Texas, USA.
Qiong YangDivision of Endocrinology, Diabetes and Metabolism, BIDMC, Boston, Massachusetts, USA.
Robert E GersztenCardiovascular Institute.
Cardiovascular Institute Hospital · JPBeth Israel Deaconess Medical Center · USBoston University · USBroad Institute · USBoston Medical Center · USLund University · SEStanford University · USThe University of Texas Southwestern Medical Center · USVanderbilt University Medical Center · US

Funding

ROLE OF DIETARY CONSTITUENTS ON GENE EXPRESSION IN INTESTINAL EPITHELIUMP30DK040561 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MARTIN TORRIANI · 1994 to 2026
$31.6M
FRAMINGHAM HEART STUDY - YEAR 5 EXAM75N92019D00031 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · 2019 to 2024
$29.8M
MULTIDISCIPLINARY RESEARCH TRAINING IN CARDIOLOGYT32HL007208 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI Patrick Thomas Ellinor, David E Sosnovik · 1985 to 2026
$16.1M
Metabolomic predictors of insulin resistance and diabetesR01DK081572 · NIDDK · VANDERBILT UNIVERSITY · PI CLISH, CLARY B, GERSZTEN, ROBERT E · 2008 to 2025
$9.3M
Proteomics of Cardiometabolic and Renal Traits in African AmericansR01HL133870 · NHLBI · UNIVERSITY OF MISSISSIPPI MED CTR · PI ROBERT E GERSZTEN · 2017 to 2026
$6.7M
Center of Excellence for High Throughput Proteogenomic CharacterizationU24CA210986 · NCI · BROAD INSTITUTE, INC. · PI CARR, STEVEN A, GILLETTE, MICHAEL A · 2016 to 2020
$6.4M
Proteomic Pathway Discovery in Cardiovascular DiseaseR01HL132320 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI GERSZTEN, ROBERT E, RAMACHANDRAN, VASAN S · 2016 to 2019
$3.4M
Chemical control of energy metabolism by N-acyl amino acidsR01DK124265 · NIDDK · STANFORD UNIVERSITY · PI LONG, JONATHAN Z · 2020 to 2024
$2.0M
The Role of PPM1G in Apolipoprotein E Biology and Atherosclerotic Cardiovascular DiseaseK08HL145095 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI BENSON, MARK DANIEL · 2019 to 2023
$836k
The Kynurenine Pathway in Pulmonary Arterial HypertensionK01GM103817 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI NGO, DEBBY · 2012 to 2016
$815k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
NCI NIH HHS U24 CA210986NHLBI NIH HHS 75N92019D00031NHLBI NIH HHS HHSN268201500001CNHLBI NIH HHS HHSN268201500001INHLBI NIH HHS K08 HL145095NHLBI NIH HHS N01 HC025195NHLBI NIH HHS R01 HL132320NHLBI NIH HHS R01 HL133870NHLBI NIH HHS T32 HL007208NIDDK NIH HHS P30 DK040561NIDDK NIH HHS R01 DK081572NIDDK NIH HHS R01 DK124265NIGMS NIH HHS K01 GM103817
6 · The paper itself

Abstract

Recent advances in proteomic technologies have made high-throughput profiling of low-abundance proteins in large epidemiological cohorts increasingly feasible. We investigated whether aptamer-based proteomic profiling could identify biomarkers associated with future development of type 2 diabetes (T2DM) beyond known risk factors. We identified dozens of markers with highly significant associations with future T2DM across 2 large longitudinal cohorts (n = 2839) followed for up to 16 years. We leveraged proteomic, metabolomic, genetic, and clinical data from humans to nominate 1 specific candidate to test for potential causal relationships in model systems. Our studies identified functional effects of aminoacylase 1 (ACY1), a top protein association with future T2DM risk, on amino acid metabolism and insulin homeostasis in vitro and in vivo. Furthermore, a loss-of-function variant associated with circulating levels of the biomarker WAP, Kazal, immunoglobulin, Kunitz, and NTR domain-containing protein 2 (WFIKKN2) was, in turn, associated with fasting glucose, hemoglobin A1c, and HOMA-IR measurements in humans. In addition to identifying potentially novel disease markers and pathways in T2DM, we provide publicly available data to be leveraged for insights about gene function and disease pathogenesis in the context of human metabolism.

Indexed as

Diabetes Mellitus, Type 2AnimalsBiomarkersCohort StudiesFemaleHumansMaleMiceMice, Inbred C57BLMiddle AgedProteomeRisk FactorsSignal TransductionBiomarkersProteomeDiabetesEndocrinologyProteomics

Identifiers

PMID33591955
PMCPMC8021115
OpenAlexW3133366951

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.