Evidence map›Paper›PMID 33591555›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2021

Genome-wide genetic marker analysis and genotyping of Escherichia fergusonii strain OTSVEF-60.

Otun Saha, Nadira Naznin Rakhi, M Nazmul Hoque, Munawar Sultana, M Anwar Hossain

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  11. Efflux Pumps and Different Genetic Contexts ofInternational journal of molecular sciences · 2023
    Article
  12. Case report: Fatal neonatal sepsis associated withFrontiers in veterinary science · 2023
    Article
  13. Article
  14. Avian strains of emerging pathogenFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Otun SahaDepartment of Microbiology, University of Dhaka, Dhaka, 1000, Bangladesh.
Nadira Naznin RakhiDepartment of Biotechnology and Genetic Engineering, Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Gopalganj, Bangladesh.
M Nazmul HoqueDepartment of Microbiology, University of Dhaka, Dhaka, 1000, Bangladesh.ORCID http://orcid.org/0000-0002-4861-0030
Munawar SultanaDepartment of Microbiology, University of Dhaka, Dhaka, 1000, Bangladesh. munawar@du.ac.bd.ORCID http://orcid.org/0000-0002-8563-3661
M Anwar HossainDepartment of Microbiology, University of Dhaka, Dhaka, 1000, Bangladesh. hossaina@du.ac.bd.
University of Dhaka · BDGopalganj Science and Technology University · BD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Poultry originated Escherichia fergusonii (POEF), an emerging bacterial pathogen, causes a wide range of intestinal and extra-intestinal infections in the poultry industry which incurred significant economic losses worldwide. Chromosomal co-existence of antibiotics and metal resistance genes has recently been the focal point of POEF isolates besides its pathogenic potentials. This study reports the complete genome analysis of POEF strain OTSVEF-60 from the poultry originated samples of Bangladesh. The assembled draft genome of the strain was 4.2 Mbp containing 4503 coding sequences, 120 RNA (rRNA = 34, tRNA = 79, ncRNA = 7), and three intact phage signature regions. Forty-one broad range antibiotic resistance genes (ARGs) including dfrA12, qnrS1, bla

Indexed as

AnimalsAnti-Bacterial AgentsCRISPR-Cas SystemsDNA Transposable ElementsDrug Resistance, BacterialEscherichiaGenome, BacterialGenotypeMicrobial Sensitivity TestsPoultryProphagesVirulenceAnti-Bacterial AgentsDNA Transposable ElementsEscherichia fergusoniiMultidrug and metal resistancePoultryVirulenceWhole genome sequence

Identifiers

PMID33591555
PMCPMC8105460
OpenAlexW3129795635

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.