Evidence map›Paper›PMID 33591309›Full record

ArticlePlant physiology2021

The metabolic origins of non-photorespiratory CO2 release during photosynthesis: a metabolic flux analysis.

Yuan Xu, Xinyu Fu, Thomas D Sharkey, Yair Shachar-Hill, And Berkley J Walker

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 1 synthesis or guideline pooled it, 121 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. C13MP, a method using C13 isotope labeling to measure plant photosynthetic rate precisely.Molecular breeding : new strategies in plant improvement · 2025
    Article
  8. Article
  9. Move over endosymbionts, peroxisomes pass electrons too.Biochemical Society transactions · 2025
    Review
  10. Article
  11. Cryptic isoprene emission of soybeans.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Non-canonical plant metabolism.Nature plants · 2025
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Frontiers in plant science · 2025
    Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yuan XuDepartment of Plant Biology, Michigan State University, Michigan 48824, USA.
Xinyu FuDepartment of Plant Biology, Michigan State University, Michigan 48824, USA.
Thomas D SharkeyDepartment of Energy-Plant Research Laboratory, Michigan State University, Michigan 48824, USA.ORCID 0000-0002-4423-3223
Yair Shachar-HillDepartment of Plant Biology, Michigan State University, Michigan 48824, USA.ORCID 0000-0001-8793-5084
And Berkley J WalkerDepartment of Plant Biology, Michigan State University, Michigan 48824, USA.ORCID 0000-0001-5932-6468
Michigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Respiration in the light (RL) releases CO2 in photosynthesizing leaves and is a phenomenon that occurs independently from photorespiration. Since RL lowers net carbon fixation, understanding RL could help improve plant carbon-use efficiency and models of crop photosynthesis. Although RL was identified more than 75 years ago, its biochemical mechanisms remain unclear. To identify reactions contributing to RL, we mapped metabolic fluxes in photosynthesizing source leaves of the oilseed crop and model plant camelina (Camelina sativa). We performed a flux analysis using isotopic labeling patterns of central metabolites during 13CO2 labeling time course, gas exchange, and carbohydrate production rate experiments. To quantify the contributions of multiple potential CO2 sources with statistical and biological confidence, we increased the number of metabolites measured and reduced biological and technical heterogeneity by using single mature source leaves and quickly quenching metabolism by directly injecting liquid N2; we then compared the goodness-of-fit between these data and data from models with alternative metabolic network structures and constraints. Our analysis predicted that RL releases 5.2 μmol CO2 g-1 FW h-1 of CO2, which is relatively consistent with a value of 9.3 μmol CO2 g-1 FW h-1 measured by CO2 gas exchange. The results indicated that ≤10% of RL results from TCA cycle reactions, which are widely considered to dominate RL. Further analysis of the results indicated that oxidation of glucose-6-phosphate to pentose phosphate via 6-phosphogluconate (the G6P/OPP shunt) can account for >93% of CO2 released by RL.

Indexed as

PhotosynthesisCamelliaCarbon DioxideMetabolic Flux AnalysisCarbon Dioxide

Identifiers

PMID33591309
PMCPMC8154043
OpenAlexW3129607641

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.