Evidence map›Paper›PMID 33590926›Full record

ArticleMolecular ecology2021

The genetic architecture of target-site resistance to pyrethroid insecticides in the African malaria vectors Anopheles gambiae and Anopheles coluzzii.

Chris S Clarkson, Alistair Miles, Nicholas J Harding, Andrias O O'Reilly, David Weetman, Dominic Kwiatkowski, Martin J Donnelly, Anopheles gambiae 1000 Genomes Consortium

Open access · hybridAbstract read
In one paragraph

Article in Molecular ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
27.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 162 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Synergistic action of different molecular mechanisms causes striking levels of insecticide resistance in the malaria vectorProceedings of the National Academy of Sciences of the United States of America · 2026
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  14. Insecticide resistance dynamics inGigaByte (Hong Kong, China) · 2026
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Chris S ClarksonWellcome Sanger Institute, Cambridge, UK.
Alistair MilesWellcome Sanger Institute, Cambridge, UK.
Nicholas J HardingBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK.
Andrias O O'ReillyLiverpool John Moores University, Liverpool, UK.
David WeetmanLiverpool School of Tropical Medicine, Liverpool, UK.
Dominic KwiatkowskiWellcome Sanger Institute, Cambridge, UK.
Martin J DonnellyWellcome Sanger Institute, Cambridge, UK.ORCID 0000-0001-5218-1497
Anopheles gambiae 1000 Genomes Consortium
Wellcome Sanger Institute · GBLiverpool School of Tropical Medicine · GBLiverpool John Moores University · GBUniversity of Oxford · GB

Funding

Genome-based diagnostics for monitoring and evaluation of insecticide resistance in Anopheles gambiaeR01AI116811 · NIAID · TMLIVERPOOL SCHOOL OF TROPICAL MEDICINE · PI Martin James Donnelly · 2016 to 2026
$4.6M
Medical Research Council MR/M006212/1Medical Research Council MR/P02520X/1NIAID NIH HHS R01 AI116811Wellcome Trust 090532/Z/09/ZWellcome Trust 090770/Z/09/ZWellcome Trust 098051Wellcome Trust 204911/Z/16/Z
6 · The paper itself

Abstract

Resistance to pyrethroid insecticides is a major concern for malaria vector control. Pyrethroids target the voltage-gated sodium channel (VGSC), an essential component of the mosquito nervous system. Substitutions in the amino acid sequence can induce a resistance phenotype. We use whole-genome sequence data from phase 2 of the Anopheles gambiae 1000 Genomes Project (Ag1000G) to provide a comprehensive account of genetic variation in the Vgsc gene across 13 African countries. In addition to known resistance alleles, we describe 20 other non-synonymous nucleotide substitutions at appreciable population frequency and map these variants onto a protein model to investigate the likelihood of pyrethroid resistance phenotypes. Thirteen of these novel alleles were found to occur almost exclusively on haplotypes carrying the known L995F kdr (knock-down resistance) allele and may enhance or compensate for the L995F resistance genotype. A novel mutation I1527T, adjacent to a predicted pyrethroid-binding site, was found in tight linkage with V402L substitutions, similar to allele combinations associated with resistance in other insect species. We also analysed genetic backgrounds carrying resistance alleles, to determine which alleles have experienced recent positive selection, and describe ten distinct haplotype groups carrying known kdr alleles. Five of these groups are observed in more than one country, in one case separated by over 3000 km, providing new information about the potential for the geographical spread of resistance. Our results demonstrate that the molecular basis of target-site pyrethroid resistance in malaria vectors is more complex than previously appreciated, and provide a foundation for the development of new genetic tools for insecticide resistance management.

Indexed as

AnophelesInsecticidesMalariaPyrethrinsAnimalsMosquito VectorsInsecticidesPyrethrinsinsecticidesmalariamosquitoesresistancevoltage-gated sodium channelwhole genome sequencing

Identifiers

PMID33590926
PMCPMC9019111
OpenAlexW3129612398

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.