Evidence map›Paper›PMID 33589834›Full record

ArticleNature neuroscience2021

Single-cell transcriptomic analysis of the adult mouse spinal cord reveals molecular diversity of autonomic and skeletal motor neurons.

Jacob A Blum, Sandy Klemm, Jennifer L Shadrach, Kevin A Guttenplan, Lisa Nakayama, Arwa Kathiria, Phuong T Hoang, Olivia Gautier, Julia A Kaltschmidt, William J Greenleaf and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers.

0numbers the graph read from it
0cells of the map it votes in
134citing papers in PubMed
21.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

134 citing papers in PubMed, 207 citations in OpenAlex.

  1. Article
  2. A who's who of cell types in skeletal muscle.Communications biology · 2026
    Review
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  18. Decoding neurodegeneration one cell at a time.The Journal of clinical investigation · 2026
    Review
  19. A consensus spinal cord cell type atlas across mouse, macaque, and human.bioRxiv : the preprint server for biology · 2026
    Article
  20. Article

74 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jacob A BlumDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Sandy Klemm *Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Jennifer L Shadrach *Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA, USA.
Kevin A GuttenplanDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0003-4242-4349
Lisa NakayamaDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Arwa KathiriaDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Phuong T HoangDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Olivia GautierDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Julia A KaltschmidtDepartment of Neurosurgery, Stanford University School of Medicine, Stanford, CA, USA.
William J GreenleafDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0003-1409-3095
Aaron D GitlerDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA. agitler@stanford.edu.ORCID http://orcid.org/0000-0001-8603-1526
Stanford University · USChan Zuckerberg Initiative (United States) · USStanford Medicine · US

Funding

Innovating Yeast and Human Genetics Approaches to Define Mechanisms of Neurodegenerative DiseaseR35NS097263 · NINDS · STANFORD UNIVERSITY · PI GITLER, AARON D. · 2017 to 2024
$8.6M
Molecular Mechanisms Regulating Inhibitory Circuitry in the Spinal CordR01NS083998 · NINDS · STANFORD UNIVERSITY · PI KALTSCHMIDT, JULIA ANNA · 2013 to 2023
$3.6M
Defining modifiers and mechanisms of RAN translationRF1AG064690 · NIA · STANFORD UNIVERSITY · PI GITLER, AARON D., PUGLISI, JOSEPH D · 2019 to 2019
$2.8M
Stanford Neurosurgery Resident Research Education ProgramR25NS065741 · NINDS · STANFORD UNIVERSITY · PI HAYDEN GEPHART, MELANIE, STEINBERG, GARY K · 2009 to 2022
$2.0M
Four Laser, 18 Color Cell Sorter in the SSFFS10RR025518 · NCRR · STANFORD UNIVERSITY · PI HERZENBERG, LEONARD A · 2009 to 2009
$500k
NCRR NIH HHS S10 RR025518NIA NIH HHS RF1 AG064690NINDS NIH HHS R01 NS083998NINDS NIH HHS R25 NS065741NINDS NIH HHS R35 NS097263
6 · The paper itself

Abstract

The spinal cord is a fascinating structure that is responsible for coordinating movement in vertebrates. Spinal motor neurons control muscle activity by transmitting signals from the spinal cord to diverse peripheral targets. In this study, we profiled 43,890 single-nucleus transcriptomes from the adult mouse spinal cord using fluorescence-activated nuclei sorting to enrich for motor neuron nuclei. We identified 16 sympathetic motor neuron clusters, which are distinguishable by spatial localization and expression of neuromodulatory signaling genes. We found surprising skeletal motor neuron heterogeneity in the adult spinal cord, including transcriptional differences that correlate with electrophysiologically and spatially distinct motor pools. We also provide evidence for a novel transcriptional subpopulation of skeletal motor neuron (γ*). Collectively, these data provide a single-cell transcriptional atlas ( http://spinalcordatlas.org ) for investigating the organizing molecular logic of adult motor neuron diversity, as well as the cellular and molecular basis of motor neuron function in health and disease.

Indexed as

AnimalsAutonomic Nervous SystemMiceMotor NeuronsMuscle, SkeletalSingle-Cell AnalysisSpinal CordTranscriptomeViscera

Identifiers

PMID33589834
PMCPMC8016743
OpenAlexW3130700305

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.