Evidence map›Paper›PMID 33589765›Full record

ArticleThe ISME journal2021

Interspecies bacterial competition regulates community assembly in the C. elegans intestine.

Anthony Ortiz, Nicole M Vega, Christoph Ratzke, Jeff Gore

Abstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. The island biology of the host microbiome.Trends in microbiology · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Mechanism ofFrontiers in microbiology · 2026
    Article
  14. Article
  15. Gut Bacteria Strategies ofMicroorganisms · 2025
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anthony OrtizPhysics of Living Systems, Department of Physics, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-6257-2141
Nicole M VegaPhysics of Living Systems, Department of Physics, Massachusetts Institute of Technology, Cambridge, MA, USA. nvega@emory.edu.ORCID http://orcid.org/0000-0002-9929-6109
Christoph RatzkePhysics of Living Systems, Department of Physics, Massachusetts Institute of Technology, Cambridge, MA, USA.
Jeff GorePhysics of Living Systems, Department of Physics, Massachusetts Institute of Technology, Cambridge, MA, USA. gore@mit.edu.ORCID http://orcid.org/0000-0003-4583-8555

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

From insects to mammals, a large variety of animals hold in their intestines complex bacterial communities that play an important role in health and disease. To further our understanding of how intestinal bacterial communities assemble and function, we study the C. elegans microbiota with a bottom-up approach by feeding this nematode with bacterial monocultures as well as mixtures of two to eight bacterial species. We find that bacteria colonizing well in monoculture do not always do well in co-cultures due to interspecies bacterial interactions. Moreover, as community diversity increases, the ability to colonize the worm gut in monoculture becomes less important than interspecies interactions for determining community assembly. To explore the role of host-microbe adaptation, we compare bacteria isolated from C. elegans intestines and non-native isolates, and we find that the success of colonization is determined more by a species' taxonomy than by the isolation source. Lastly, by comparing the assembled microbiotas in two C. elegans mutants, we find that innate immunity via the p38 MAPK pathway decreases bacterial abundances yet has little influence on microbiota composition. These results highlight that bacterial interspecies interactions, more so than host-microbe adaptation or gut environmental filtering, play a dominant role in the assembly of the C. elegans microbiota.

Indexed as

Caenorhabditis elegansMicrobiotaAnimalsBacteriaIntestines

Identifiers

PMID33589765
PMCPMC8245486

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.