Evidence map›Paper›PMID 33589671›Full record

ArticleScientific reports2021

Bacterial and fungal endophyte communities in healthy and diseased oilseed rape and their potential for biocontrol of Sclerotinia and Phoma disease.

C S Schmidt, L Mrnka, P Lovecká, T Frantík, M Fenclová, K Demnerová, M Vosátka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Biocontrol of Fungal Pathogens of Winter Oilseed Rape (Molecules (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Plants (Basel, Switzerland) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Response of the Endophytic Microbiome inJournal of fungi (Basel, Switzerland) · 2024
    Article
  10. Article
  11. Plant-AssociatedPlants (Basel, Switzerland) · 2023
    Review
  12. Review
  13. Frontiers in microbiology · 2023
    Review
  14. Seed EndophyticMolecules (Basel, Switzerland) · 2022
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

C S SchmidtDepartment of Mycorrhizal Symbioses, Institute of Botany, Czech Academy of Sciences, Lesní 322, 25243, Průhonice, Czech Republic.
L MrnkaDepartment of Mycorrhizal Symbioses, Institute of Botany, Czech Academy of Sciences, Lesní 322, 25243, Průhonice, Czech Republic. libor.mrnka@ibot.cas.cz.
P LoveckáUniversity of Chemistry and Technology, Technická 5, 166 28, Prague 6-Dejvice, Czech Republic.
T FrantíkDepartment of Mycorrhizal Symbioses, Institute of Botany, Czech Academy of Sciences, Lesní 322, 25243, Průhonice, Czech Republic.
M FenclováUniversity of Chemistry and Technology, Technická 5, 166 28, Prague 6-Dejvice, Czech Republic.
K DemnerováUniversity of Chemistry and Technology, Technická 5, 166 28, Prague 6-Dejvice, Czech Republic.
M VosátkaDepartment of Mycorrhizal Symbioses, Institute of Botany, Czech Academy of Sciences, Lesní 322, 25243, Průhonice, Czech Republic.
Czech Academy of Sciences, Institute of Botany · CZUniversity of Chemistry and Technology, Prague · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phoma stem canker (caused by the ascomycetes Leptosphaeria maculans and Leptosphaeria biglobosa) is an important disease of oilseed rape. Its effect on endophyte communities in roots and shoots and the potential of endophytes to promote growth and control diseases of oilseed rape (OSR) was investigated. Phoma stem canker had a large effect especially on fungal but also on bacterial endophyte communities. Dominant bacterial genera were Pseudomonas, followed by Enterobacter, Serratia, Stenotrophomonas, Bacillus and Staphylococcus. Achromobacter, Pectobacter and Sphingobacterium were isolated only from diseased plants, though in very small numbers. The fungal genera Cladosporium, Botrytis and Torula were dominant in healthy plants whereas Alternaria, Fusarium and Basidiomycetes (Vishniacozyma, Holtermaniella, Bjerkandera/Thanatephorus) occurred exclusively in diseased plants. Remarkably, Leptosphaeria biglobosa could be isolated in large numbers from shoots of both healthy and diseased plants. Plant growth promoting properties (antioxidative activity, P-solubilisation, production of phytohormones and siderophores) were widespread in OSR endophytes. Although none of the tested bacterial endophytes (Achromobacter, Enterobacter, Pseudomonas, Serratia and Stenotrophomonas) promoted growth of oilseed rape under P-limiting conditions or controlled Phoma disease on oilseed rape cotyledons, they significantly reduced incidence of Sclerotinia disease. In the field, a combined inoculum consisting of Achromobacter piechaudii, two pseudomonads and Stenotrophomonas rhizophila tendencially increased OSR yield and reduced Phoma stem canker.

Indexed as

AchromobacterAscomycotaBrassica napusDisease ResistanceEndophytesMycobiomePhomaPlant DiseasesPlant RootsStenotrophomonas

Identifiers

PMID33589671
PMCPMC7884388
OpenAlexW3130661970

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.