Evidence map›Paper›PMID 33587226›Full record

ArticleAntonie van Leeuwenhoek2021

Characterisation of hydrocarbon degradation, biosurfactant production, and biofilm formation in Serratia sp. Tan611: a new strain isolated from industrially contaminated environment in Algeria.

Annela Semai, Frédéric Plewniak, Armelle Charrié-Duhaut, Amalia Sayeh, Lisa Gil, Céline Vandecasteele, Céline Lopez-Roques, Emmanuelle Leize-Wagner, Farid Bensalah, Philippe N Bertin

Abstract read
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In one paragraph

Article in Antonie van Leeuwenhoek, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Annela SemaiGénétique Moléculaire, Génomique et Microbiologie (GMGM), UMR 7156, Université de Strasbourg, Strasbourg, France.
Frédéric PlewniakGénétique Moléculaire, Génomique et Microbiologie (GMGM), UMR 7156, Université de Strasbourg, Strasbourg, France.
Armelle Charrié-DuhautLaboratoire de Spectrométrie de Masse des Interactions et des Systèmes (LSMIS), UMR 7140, Université de Strasbourg, Strasbourg, France.
Amalia SayehINRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Lisa GilINRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Céline VandecasteeleINRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Céline Lopez-RoquesINRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Emmanuelle Leize-WagnerLaboratoire de Spectrométrie de Masse des Interactions et des Systèmes (LSMIS), UMR 7140, Université de Strasbourg, Strasbourg, France.
Farid BensalahLaboratoire de Génétique Microbienne, Université d'Oran1 Ahmed Ben Bella, Oran, Algeria.
Philippe N BertinGénétique Moléculaire, Génomique et Microbiologie (GMGM), UMR 7156, Université de Strasbourg, Strasbourg, France. philippe.bertin@unistra.fr.ORCID http://orcid.org/0000-0003-1158-6396

Funding

Algerian Ministry for Higher Education and Scientific Research scholarshipFrance Génomique ANR-10-INBS-09
6 · The paper itself

Abstract

A novel bacterial strain was isolated from industrially contaminated waste water. In the presence of crude oil, this strain was shown to reduce the rate of total petroleum hydrocarbons (TPH) up to 97.10% in 24 h. This bacterium was subsequently identified by 16S rRNA gene sequence analysis and affiliated to the Serratia genus by the RDP classifier. Its genome was sequenced and annotated, and genes coding for catechol 1,2 dioxygenase and naphthalene 1,2-dioxygenase system involved in aromatic hydrocarbon catabolism, and LadA-type monooxygenases involved in alkane degradation, were identified. Gas Chromatography-Mass Spectrometry (GC-MS) analysis of crude oil after biological treatment showed that Serratia sp. Tan611 strain was able to degrade n-alkanes (from C

Indexed as

PetroleumSerratiaAlgeriaBiodegradation, EnvironmentalBiofilmsHydrocarbonsRNA, Ribosomal, 16SHydrocarbonsPetroleumRNA, Ribosomal, 16SAromatic hydrocarbon catabolismBioremediationBiosurfactantn-alkanesTotal petroleum hydrocarbons (TPH)

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.