Evidence map›Paper›PMID 33587148›Full record

ArticleUrolithiasis2021

Exploring mechanisms of protein influence on calcium oxalate kidney stone formation.

Garrett K Berger, Jessica Eisenhauer, Andrew Vallejos, Brian Hoffmann, Jeffrey A Wesson

Open access · greenAbstract read
In one paragraph

Article in Urolithiasis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Impact of diet on renal stone formation.Journal of family medicine and primary care · 2024
    Review
  6. Article
  7. Review
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Garrett K BergerDivision of Nephrology, Department of Medicine, Medical College of Wisconsin, 9200 W Wisconsin Avenue, Milwaukee, WI, 53295, USA.ORCID http://orcid.org/0000-0001-8389-0691
Jessica EisenhauerDivision of Nephrology, Department of Medicine, Medical College of Wisconsin, 9200 W Wisconsin Avenue, Milwaukee, WI, 53295, USA.
Andrew VallejosDepartment of Biomedical Engineering, Max McGee National Research Center, Cardiovascular Center, Center for Advancing Population Science, Medical College of Wisconsin and Marquette University, 8701 Watertown Plank Road, Milwaukee, WI, 53226, USA.
Brian HoffmannClinical Science and Translational Institute, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI, 53226, USA.
Jeffrey A WessonDivision of Nephrology, Department of Medicine, Medical College of Wisconsin, 9200 W Wisconsin Avenue, Milwaukee, WI, 53295, USA. jwesson@mcw.edu.ORCID http://orcid.org/0000-0002-2181-0323
Medical College of Wisconsin · USMarquette University · US

Funding

Influence of Urinary Macromolecules on Crystal AggregationR01DK082550 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI WESSON, JEFFREY A · 2009 to 2012
$818k
NIDDK Research Education ProgramR25DK098104 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI DWINELL, MICHAEL B, REGNER, KEVIN R. · 2013 to 2017
$273k
IDENTIFYING KEY PROTEINS IN CALCIUM OXALATE KIDNEY STONE FORMATION USING STONE MATRIX PROTEOMICSI01CX001491 · VA · CLEMENT J. ZABLOCKI VA MEDICAL CENTER · PI WESSON, JEFFREY A · 2018 to 2022
–
CSRD VA I01 CX001491NIDDK NIH HHS R01 DK082550NIDDK NIH HHS R25 DK098104NIDDK NIH HHS R25DK098104NIH HHS DK 82550U.S. Department of Veterans Affairs CX-001491-01A2
6 · The paper itself

Abstract

Calcium oxalate monohydrate (COM) crystals are the primary constituent of most kidney stones, but urine proteins in stone matrix are believed to be critical elements for stone formation from these crystals. Recent data have shown that hundreds of proteins appear in the stone matrix with no explanation for inclusion of so many proteins. We have proposed a stone formation model with protein stimulated COM aggregation based on polyanion-polycation aggregation, which is supported by finding that matrix is highly enriched in strongly anionic and strongly cationic proteins. Many other proteins may be drawn to such aggregates due to their limited solubility in water or charge effects. Finding similar protein enrichment in both polyarginine (pR) induced aggregates of urine proteins and COM stone matrix would support this hypothesis. Purified proteins (PP) were obtained from random urine samples of six healthy adults by ultradiafiltration. Protein aggregation was induced by adding pR to PP solutions at two concentrations; 0.25 and 0.5 µg pR/µg of PP. Samples of each fraction and the original PP mixture were lyophilized and analyzed by tandem mass spectrometry. Aggregates induced by pR addition to PP samples collected a protein mixture that mimicked the protein distribution observed in COM matrix, supporting our hypothesis. The apparently discordant behavior of certain abundant anionic proteins preferentially joining the pR aggregate, when they had demonstrated reduced abundance in COM stone matrix, suggests that this model was overdriven to aggregate. The reversal of aggregate preference of albumin at low pR addition supports this interpretation.

Indexed as

Calcium OxalateAdultAgedFemaleHumansKidney CalculiMaleMiddle AgedProteinsCalcium OxalateProteinsCalcium oxalateKidney calculiNephrolithiasisUrine proteome

Identifiers

PMID33587148
PMCPMC8316271
OpenAlexW3131337136

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.