Evidence map›Paper›PMID 33587037›Full record

ArticleeLife2021

SNPC-1.3 is a sex-specific transcription factor that drives male piRNA expression in

Charlotte P Choi, Rebecca J Tay, Margaret R Starostik, Suhua Feng, James J Moresco, Brooke E Montgomery, Emily Xu, Maya A Hammonds, Michael C Schatz, Taiowa A Montgomery and 3 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Charlotte P Choi *Department of Biology, Johns Hopkins University, Baltimore, United States.ORCID 0000-0002-1857-6599
Rebecca J Tay *Department of Biology, Johns Hopkins University, Baltimore, United States.ORCID 0000-0002-2270-0505
Margaret R StarostikDepartment of Biology, Johns Hopkins University, Baltimore, United States.ORCID 0000-0002-5274-2765
Suhua FengDepartment of Molecular, Cell and Developmental Biology, University of California, Los Angeles, Los Angeles, United States.
James J MorescoCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, United States.
Brooke E MontgomeryDepartment of Biology, Colorado State University, Fort Collins, United States.
Emily XuDepartment of Biology, Johns Hopkins University, Baltimore, United States.
Maya A HammondsDepartment of Biology, Johns Hopkins University, Baltimore, United States.
Michael C SchatzDepartment of Biology, Johns Hopkins University, Baltimore, United States.
Taiowa A MontgomeryDepartment of Biology, Colorado State University, Fort Collins, United States.ORCID 0000-0001-7857-3253
John R YatesDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, United States.ORCID 0000-0001-5267-1672
Steven E JacobsenDepartment of Molecular, Cell and Developmental Biology, University of California, Los Angeles, Los Angeles, United States.
John K KimDepartment of Biology, Johns Hopkins University, Baltimore, United States.ORCID 0000-0001-9838-3254
Johns Hopkins University · USColorado State University · USHoward Hughes Medical Institute · USScripps Research Institute · USSouthwestern Medical Center · USUniversity of California, Los Angeles · US

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Mechanism and function of small RNAs in development and gene silencing in the germlineR35GM119775 · NIGMS · COLORADO STATE UNIVERSITY · PI Taiowa Akoni Montgomery · 2016 to 2026
$4.3M
Formation and Function of Glycolytic Bodies in HypoxiaR01GM129301 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KIM, JOHN · 2018 to 2021
$1.9M
Epigenetic gene regulation in ArabidopsisR35GM130272 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JACOBSEN, STEVEN E · 2019 to 2023
$1.6M
The role of post-translational modifications in miRISC functionR01GM118875 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KIM, JOHN · 2016 to 2019
$1.4M
NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM118875NIGMS NIH HHS R01 GM129301NIGMS NIH HHS R35 GM119775NIGMS NIH HHS R35 GM130272NIGMS NIH HHS T32 GM007231NIH HHS P40 OD010440
6 · The paper itself

Abstract

Piwi-interacting RNAs (piRNAs) play essential roles in silencing repetitive elements to promote fertility in metazoans. Studies in worms, flies, and mammals reveal that piRNAs are expressed in a sex-specific manner. However, the mechanisms underlying this sex-specific regulation are unknown. Here we identify SNPC-1.3, a male germline-enriched variant of a conserved subunit of the small nuclear RNA-activating protein complex, as a male-specific piRNA transcription factor in

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA-Binding ProteinsFemaleGene Expression RegulationGene Expression Regulation, DevelopmentalGerm CellsMaleRNA, Small InterferingSpecies SpecificitySpermatogenesisTranscription FactorsCaenorhabditis elegans ProteinsDNA-Binding ProteinsRNA, Small InterferingSNPC-1.3 protein, C elegansTranscription FactorsC. eleganschromosomesgene expressiongeneticsgenomicsgermline developmentpiRNAsex determinationspermatogenesisTRA-1transcription

Identifiers

PMID33587037
PMCPMC7884074
OpenAlexW3132761104

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.