Evidence map›Paper›PMID 33585273›Full record

ArticleFrontiers in cellular and infection microbiology2020

Metabolomics Exploration of Pseudorabies Virus Reprogramming Metabolic Profiles of PK-15 Cells to Enhance Viral Replication.

Hongchao Gou, Zhibiao Bian, Yan Li, Rujian Cai, Zhiyong Jiang, Shuai Song, Kunli Zhang, Pinpin Chu, Dongxia Yang, Chunling Li

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Hongchao GouInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Zhibiao BianInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Yan LiInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Rujian CaiInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Zhiyong JiangInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Shuai SongInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Kunli ZhangInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Pinpin ChuInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Dongxia YangInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Chunling LiInstitute of Animal Health, Guangdong Academy of Agricultural Sciences, Guangzhou, China.
Guangdong Academy of Agricultural Sciences · CNGuangdong Provincial Center for Disease Control and Prevention · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For viral replication to occur in host cells, low-molecular-weight metabolites are necessary for virion assembly. Recently, metabolomics has shown great promise in uncovering the highly complex mechanisms associated with virus-host interactions. In this study, the metabolic networks in PK-15 cells infected with a variant virulent or classical attenuated pseudorabies virus (PRV) strains were explored using gas chromatography-mass spectrometry (GC-MS) analysis. Although total numbers of metabolites whose levels were altered by infection with the variant virulent strain or the classical attenuated strain were different at 8 and 16 h post infection (hpi), the predicted levels of differential metabolic components were shown to be associated with specific pathways, including glycolysis as well as amino acid and nucleotide metabolism. The glucose depletion and glycolysis inhibitors 2DG and oxamate could reduce the level of PRV replication in PK-15 cells. In addition, the inhibition of the pentose phosphate pathway (PPP) resulted in an obvious decline of viral titers, but the prevention of oxidative phosphorylation in the tricarboxylic acid (TCA) cycle had a minimal effect on viral replication. Glutamine starvation resulted in the decline of viral titers, which could be restored by supplemental addition in the culture media. However, inhibition of glutaminase (GLS) activity or the supplement of 2-ketoglutarate into glutamine-deleted DMEM did not alter PRV replication in PK-15 cells. The results of the current study indicate that PRV reprograms the metabolic activities of PK-15 cells. The metabolic flux from glycolysis, PPP and glutamine metabolism to nucleotide biosynthesis was essential for PRV to enhance its replication. This study will help to identify the biochemical materials utilized by PRV replication in host cells, and this knowledge can aid in developing new antiviral strategies.

Indexed as

Herpesvirus 1, SuidPseudorabiesAnimalsMetabolomeMetabolomicsVirus Replicationclassical attenuated strainmetabolic activitymetabolomicsPK-15 cellspseudorabies virus (PRV)variant virulent strain

Identifiers

PMID33585273
PMCPMC7879706
OpenAlexW3126992095

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.