Evidence map›Paper›PMID 33581333›Full record

ArticleMitochondrion2021

Elevated mitochondrial DNA copy number found in ubiquinone-deficient clk-1 mutants is not rescued by ubiquinone precursor 2-4-dihydroxybenzoate.

Cait S Kirby, Maulik R Patel

Open access · greenAbstract read
In one paragraph

Article in Mitochondrion, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Mitochondrial Factors in the Cell Nucleus.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Cait S KirbyDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.
Maulik R PatelDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA; Department of Cell and Developmental Biology, Vanderbilt University, Nashville, TN 37232, USA; Diabetes Research and Training Center, Vanderbilt University, Nashville, TN 37232, USA. Electronic address: maulik.r.patel@vanderbilt.edu.
Vanderbilt University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Regulation of mitochondrial heteroplasmy dynamicsR01GM123260 · NIGMS · VANDERBILT UNIVERSITY · PI PATEL, MAULIK R · 2017 to 2021
$1.5M
Mechanisms of mitochondrial DNA copy number regulationF31GM131581 · NIGMS · VANDERBILT UNIVERSITY · PI KIRBY, CAITLYN · 2019 to 2021
$68k
NIGMS NIH HHS F31 GM131581NIGMS NIH HHS R01 GM123260NIH HHS P40 OD010440
6 · The paper itself

Abstract

Inside mitochondria reside semi-autonomous genomes, called mtDNA. mtDNA is multi-copy per cell and mtDNA copy number can vary from hundreds to thousands of copies per cell. The variability of mtDNA copy number between tissues, combined with the lack of variability of copy number within a tissue, suggest a homeostatic copy number regulation mechanism. Mutations in the gene encoding the Caenorhabditis elegans hydroxylase, CLK-1, result in elevated mtDNA. CLK-1's canonical role in ubiquinone biosynthesis results in clk-1 mutants lacking ubiquinone. Importantly, clk-1 mutants also exhibit slowed biological timing phenotypes (pharyngeal pumping, defecation, development) and an activated stress response (UPR

Indexed as

DNA Copy Number VariationsMutationAllelesAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA, MitochondrialHydroxybenzoatesUbiquinoneCaenorhabditis elegans ProteinsCLK-1 protein, C elegansDNA, MitochondrialHydroxybenzoatesUbiquinone2-4-DihydroxybenzoateCLK-1Copy numberCOQ-7Mitochondrial DNAUbiquinone

Identifiers

PMID33581333
PMCPMC8113126
OpenAlexW3131509892

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.