Evidence map›Paper›PMID 33580260›Full record

ArticleThe Plant cell2021

Potential transceptor AtNRT1.13 modulates shoot architecture and flowering time in a nitrate-dependent manner.

Hui-Yu Chen, Shan-Hua Lin, Ling-Hsin Cheng, Jeng-Jong Wu, Yi-Chen Lin, Yi-Fang Tsay

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
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  10. Identification and Functional Characterization ofInternational journal of molecular sciences · 2023
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  17. Dynamic Nutrient Signaling Networks in Plants.Annual review of cell and developmental biology · 2021
    Review
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hui-Yu ChenInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-5288-1730
Shan-Hua LinInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-6476-7740
Ling-Hsin ChengInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-0606-5054
Jeng-Jong WuInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0003-3525-4791
Yi-Chen LinInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0003-1112-2831
Yi-Fang TsayInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0003-4271-0687
Institute of Molecular Biology, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Compared with root development regulated by external nutrients, less is known about how internal nutrients are monitored to control plasticity of shoot development. In this study, we characterize an Arabidopsis thaliana transceptor, NRT1.13 (NPF4.4), of the NRT1/PTR/NPF family. Different from most NRT1 transporters, NRT1.13 does not have the conserved proline residue between transmembrane domains 10 and 11; an essential residue for nitrate transport activity in CHL1/NRT1.1/NPF6.3. As expected, when expressed in oocytes, NRT1.13 showed no nitrate transport activity. However, when Ser 487 at the corresponding position was converted back to proline, NRT1.13 S487P regained nitrate uptake activity, suggesting that wild-type NRT1.13 cannot transport nitrate but can bind it. Subcellular localization and β-glucuronidase reporter analyses indicated that NRT1.13 is a plasma membrane protein expressed at the parenchyma cells next to xylem in the petioles and the stem nodes. When plants were grown with a normal concentration of nitrate, nrt1.13 showed no severe growth phenotype. However, when grown under low-nitrate conditions, nrt1.13 showed delayed flowering, increased node number, retarded branch outgrowth, and reduced lateral nitrate allocation to nodes. Our results suggest that NRT1.13 is required for low-nitrate acclimation and that internal nitrate is monitored near the xylem by NRT1.13 to regulate shoot architecture and flowering time.

Indexed as

AnimalsArabidopsisArabidopsis ProteinsBiological TransportCell MembraneFlowersGene Expression Regulation, PlantMADS Domain ProteinsModels, BiologicalMutationNitratesPhenotypePlant ShootsTime FactorsXenopusXylemArabidopsis ProteinsAt5g10140 protein, ArabidopsisMADS Domain ProteinsNitrates

Identifiers

PMID33580260
PMCPMC8254489
OpenAlexW3127905132

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.