Evidence map›Paper›PMID 33579944›Full record

ArticleNature communications2021

Chromatin accessibility of circulating CD8

Hyun Mu Shin, Gwanghun Kim, Sangjib Kim, Ji Hyun Sim, Jiyeob Choi, Minji Kim, Minsuk Kwon, Sang-Kyu Ye, Dong-Sup Lee, Seung Woo Cho and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Role of lysine-specific demethylase 1 in immunotherapy of gastric cancer: An update.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2024
    Article
  4. Three-dimensional isotropic imaging of live suspension cells enabled by droplet microvortices.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. CRIF1 deficiency induces FOXP3Science advances · 2024
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Gastric cancer and genomics: review of literature.Journal of gastroenterology · 2022
    Review
  15. Review
  16. Review
  17. Lack of CD8Science immunology · 2021
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Hyun Mu Shin *Wide River Institute of Immunology, Seoul National University, Hongcheon, Republic of Korea. hyunmu.shin@snu.ac.kr.ORCID 0000-0002-4521-8391
Gwanghun Kim *Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Sangjib Kim *Department of Mathematics, College of Science, Korea University, Seoul, Republic of Korea.ORCID 0000-0001-5229-9460
Ji Hyun Sim *Department of Anatomy and Cell Biology, Seoul National University College of Medicine, Seoul, Republic of Korea.
Jiyeob ChoiDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Minji KimDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Minsuk KwonDepartment of Medicine, Division of Hematology-Oncology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Republic of Korea.ORCID 0000-0003-1833-6576
Sang-Kyu YeDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Dong-Sup LeeWide River Institute of Immunology, Seoul National University, Hongcheon, Republic of Korea.
Seung Woo ChoDepartment of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Republic of Korea.ORCID 0000-0001-9091-0937
Seung Tae KimDepartment of Medicine, Division of Hematology-Oncology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Republic of Korea.
Jeeyun LeeDepartment of Medicine, Division of Hematology-Oncology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Republic of Korea. jyunlee@skku.edu.ORCID 0000-0002-4911-6165
Hang-Rae KimWide River Institute of Immunology, Seoul National University, Hongcheon, Republic of Korea. hangrae2@snu.ac.kr.ORCID 0000-0002-3983-6193

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although tumor genomic profiling has identified small subsets of gastric cancer (GC) patients with clinical benefit from anti-PD-1 treatment, not all responses can be explained by tumor sequencing alone. We investigate epigenetic elements responsible for the differential response to anti-PD-1 therapy by quantitatively assessing the genome-wide chromatin accessibility of circulating CD8

Indexed as

ChromatinBiomarkers, TumorCD8-Positive T-LymphocytesCell ProliferationChromatin Immunoprecipitation SequencingGenomeHumansProgrammed Cell Death 1 ReceptorSequence AlignmentSequence Analysis, DNAStomach NeoplasmsTransposasesBiomarkers, TumorChromatinProgrammed Cell Death 1 ReceptorTransposases

Identifiers

PMID33579944
PMCPMC7881150

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.