Evidence map›Paper›PMID 33579752›Full record

ArticleGenome research2021

A minimally destructive protocol for DNA extraction from ancient teeth.

Éadaoin Harney, Olivia Cheronet, Daniel M Fernandes, Kendra Sirak, Matthew Mah, Rebecca Bernardos, Nicole Adamski, Nasreen Broomandkhoshbacht, Kimberly Callan, Ann Marie Lawson and 31 more

Abstract read
In one paragraph

Article in Genome research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Minimally Destructive Radiocarbon Dating of Bone.Rapid communications in mass spectrometry : RCM · 2026
    Article
  5. Article
  6. The persistence and loss of hard selective sweeps amid admixture in ancient Eurasians.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. On the Edge of Empire: Paleogenomic Insights into Roman Dacia.bioRxiv : the preprint server for biology · 2026
    Article
  8. The Genomic Legacy of the Norman Conquest in Rural England.bioRxiv : the preprint server for biology · 2026
    Article
  9. Article
  10. Article
  11. Review
  12. Global patterns of natural selection inferred using ancient DNA.bioRxiv : the preprint server for biology · 2026
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors.

Éadaoin Harney *Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts 02138, USA.ORCID 0000-0001-9385-7297
Olivia Cheronet *Department of Evolutionary Anthropology, University of Vienna, Vienna 1090, Austria.ORCID 0000-0001-6760-1204
Daniel M FernandesDepartment of Evolutionary Anthropology, University of Vienna, Vienna 1090, Austria.
Kendra SirakDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Matthew MahDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Rebecca BernardosDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Nicole AdamskiDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Nasreen BroomandkhoshbachtDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Kimberly CallanDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Ann Marie LawsonDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Jonas OppenheimerDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Kristin StewardsonDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Fatma ZalzalaDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Alexandra AndersInstitute of Archaeological Sciences, Eötvös Loránd University, 1088 Budapest, Hungary.
Francesca CandilioSuperintendency of Archaeology, Fine Arts and Landscape for the City of Cagliari and the Provinces of Oristano and South Sardinia, 09121 Cagliari, Italy.
Mihai ConstantinescuFr. I. Rainer Institute of Anthropology, Bucharest 050711, Romania.
Alfredo CoppaDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Ion CiobanuCultural-Natural Reserve "Orheiul Vechi", 3552 Orhei, Republic of Moldova.
János DaniDéri Museum, 4026 Debrecen, Hungary.
Zsolt GallinaÁsatárs Kulturális, Régészeti Szolgáltató és Kereskedelmi Limited, 6000 Kecskemét, Hungary.
Francesco GenchiDepartment of Environmental Biology, Sapienza University, 00185 Rome, Italy.
Emese Gyöngyvér NagyDéri Museum, 4026 Debrecen, Hungary.
Tamás HajduDepartment of Biological Anthropology, Eötvös Loránd University, 1171 Budapest, Hungary.
Magdolna HellebrandtHerman Ottó Museum, 3529 Miskolc, Hungary.
Antónia HorváthHerman Ottó Museum, 3529 Miskolc, Hungary.
Ágnes KirályInstitute of Archaeology, Research Centre for the Humanities, 1097 Budapest, Hungary.
Krisztián KissDepartment of Biological Anthropology, Eötvös Loránd University, 1171 Budapest, Hungary.
Barbara KolozsiDéri Museum, 4026 Debrecen, Hungary.
Péter KovácsDamjanich János Museum, 5000 Szolnok, Hungary.
Kitti KöhlerInstitute of Archaeology, Research Centre for the Humanities, 1097 Budapest, Hungary.
Michaela LucciDepartment of History, Anthropology, Religion, Arts and Performing Arts, Sapienza University, 00185 Rome, Italy.
Ildikó PapDepartment of Anthropology, Hungarian Natural History Museum, 1083 Budapest, Hungary.
Sergiu PopoviciNational Agency for Archaeology, 2012 Chișinău, Republic of Moldova.
Pál RaczkyInstitute of Archaeological Sciences, Eötvös Loránd University, 1088 Budapest, Hungary.
Angela SimalcsikInstitute of Bioarchaeological and Ethnocultural Research, 2012 Chișinău, Republic of Moldova.
Tamás SzeniczeyDepartment of Biological Anthropology, Eötvös Loránd University, 1171 Budapest, Hungary.
Sergey VasilyevInstitute of Ethnology and Anthropology of the Russian Academy of Sciences, 119991 Moscow, Russia.
Cristian ViragSatu Mare County Museum, 440031 Satu Mare, Romania.
Nadin RohlandDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
David ReichThe Max Planck-Harvard Research Center for the Archaeoscience of the Ancient Mediterranean, Cambridge, Massachusetts 02138, USA and Jena D-07745, Germany.
Ron PinhasiDepartment of Evolutionary Anthropology, University of Vienna, Vienna 1090, Austria.ORCID 0000-0003-1629-8131

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ancient DNA sampling methods-although optimized for efficient DNA extraction-are destructive, relying on drilling or cutting and powdering (parts of) bones and teeth. As the field of ancient DNA has grown, so have concerns about the impact of destructive sampling of the skeletal remains from which ancient DNA is obtained. Due to a particularly high concentration of endogenous DNA, the cementum of tooth roots is often targeted for ancient DNA sampling, but destructive sampling methods of the cementum often result in the loss of at least one entire root. Here, we present a minimally destructive method for extracting ancient DNA from dental cementum present on the surface of tooth roots. This method does not require destructive drilling or grinding, and, following extraction, the tooth remains safe to handle and suitable for most morphological studies, as well as other biochemical studies, such as radiocarbon dating. We extracted and sequenced ancient DNA from 30 teeth (and nine corresponding petrous bones) using this minimally destructive extraction method in addition to a typical tooth sampling method. We find that the minimally destructive method can provide ancient DNA that is of comparable quality to extracts produced from teeth that have undergone destructive sampling processes. Further, we find that a rigorous cleaning of the tooth surface combining diluted bleach and UV light irradiation seems sufficient to minimize external contaminants usually removed through the physical removal of a superficial layer when sampling through regular powdering methods.

Indexed as

Dental CementumDNA, AncientHumansMaleToothDNA, Ancient

Identifiers

PMID33579752
PMCPMC7919446

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.