Evidence map›Paper›PMID 33579750›Full record

ArticleScience immunology2021

Innate cell microenvironments in lymph nodes shape the generation of T cell responses during type I inflammation.

Joseph M Leal, Jessica Y Huang, Karan Kohli, Caleb Stoltzfus, Miranda R Lyons-Cohen, Brandy E Olin, Michael Gale, Michael Y Gerner

Abstract read
In one paragraph

Article in Science immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed.

  1. Trial
  2. Article
  3. What Do We Know About Immune System Aging from Human and Animal Studies?International journal of molecular sciences · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Monocyte-derived TGF-β shapes memory CD8+ T cells.Cellular & molecular immunology · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Joseph M LealDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA.ORCID 0000-0002-9144-6766
Jessica Y HuangDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA.ORCID 0000-0001-8674-5924
Karan KohliDepartment of Surgery, University of Washington School of Medicine, Seattle, WA 98109, USA.
Caleb StoltzfusDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA.ORCID 0000-0002-0543-345X
Miranda R Lyons-CohenDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA.ORCID 0000-0002-6537-8827
Brandy E OlinDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA.ORCID 0000-0002-6952-756X
Michael GaleDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA.ORCID 0000-0002-6332-7436
Michael Y GernerDepartment of Immunology, Center for Innate Immunity and Immune Disease, University of Washington School of Medicine, Seattle, WA 98109, USA. gernermy@uw.edu.ORCID 0000-0001-5406-8308

Funding

Washington National Primate Research CenterP51OD010425 · OD · UNIVERSITY OF WASHINGTON · PI Mari Ostendorf · 2012 to 2026
$201.8M
TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
The Roles of Lymphoid Tissue Microenvironments in Guiding the Immune ResponseR01AI134713 · NIAID · UNIVERSITY OF WASHINGTON · PI Michael Gerner · 2018 to 2026
$4.4M
Innate Immune Regulation of Zika Virus InfectionR01AI145296 · NIAID · UNIVERSITY OF WASHINGTON · PI COYNE, CAROLYN B, DIAMOND, MICHAEL S · 2019 to 2023
$4.1M
Innate Immune Control of West Nile VirusR01AI104002 · NIAID · UNIVERSITY OF WASHINGTON · PI DIAMOND, MICHAEL S, GALE, MICHAEL · 2013 to 2017
$3.7M
Basic Training at the Intersection of Innate and Adaptive Immunity in DiseaseT32AI106677 · NIAID · UNIVERSITY OF WASHINGTON · PI GALE, MICHAEL, GOVERMAN, JOAN M · 2013 to 2022
$2.1M
Novel approaches to study the intersection of cellular heterogeneity and tissue microanatomyR21AI142667 · NIAID · UNIVERSITY OF WASHINGTON · PI GERNER, MICHAEL · 2019 to 2020
$485k
Micro-anatomical organization of innate and adaptive immune responsesK22AI108628 · NIAID · UNIVERSITY OF WASHINGTON · PI GERNER, MICHAEL · 2016 to 2017
$270k
NIAID NIH HHS K22 AI108628NIAID NIH HHS R01 AI104002NIAID NIH HHS R01 AI134713NIAID NIH HHS R01 AI145296NIAID NIH HHS R21 AI142667NIAID NIH HHS T32 AI106677NIGMS NIH HHS T32 GM007270NIH HHS P51 OD010425
6 · The paper itself

Abstract

Microanatomical organization of innate immune cells within lymph nodes (LNs) is critical for the generation of adaptive responses. In particular, steady-state LN-resident dendritic cells (Res cDCs) are strategically localized to intercept lymph-draining antigens. Whether myeloid cell organization changes during inflammation and how that might affect the generation of immune responses are unknown. Here, we report that during type I, but not type II, inflammation after adjuvant immunization or viral infection, antigen-presenting Res cDCs undergo CCR7-dependent intranodal repositioning from the LN periphery into the T cell zone (TZ) to elicit T cell priming. Concurrently, inflammatory monocytes infiltrate the LNs via local blood vessels, enter the TZ, and cooperate with Res cDCs by providing polarizing cytokines to optimize T cell effector differentiation. Monocyte infiltration is nonuniform across LNs, generating distinct microenvironments with varied local innate cell composition. These spatial microdomains are associated with divergent early T cell effector programming, indicating that innate microenvironments within LNs play a critical role in regulating the quality and heterogeneity of T cell responses. Together, our findings reveal that dynamic modulation of innate cell microenvironments during type I inflammation leads to optimized generation of adaptive immune responses to vaccines and infections.

Indexed as

Adoptive TransferAnimalsCell CommunicationCell MovementCellular MicroenvironmentDendritic CellsDisease Models, AnimalHumansImmunity, InnateInflammationLymph NodesLymphocyte ActivationMiceMice, TransgenicMonocytesNippostrongylus

Identifiers

PMID33579750
PMCPMC8274717

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.