Evidence map›Paper›PMID 33579350›Full record

ArticleClinical epigenetics2021

5-AZA-dC induces epigenetic changes associated with modified glycosylation of secreted glycoproteins and increased EMT and migration in chemo-sensitive cancer cells.

Gordon Greville, Esther Llop, Jane Howard, Stephen F Madden, Antoinette S Perry, Rosa Peracaula, Pauline M Rudd, Amanda McCann, Radka Saldova

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Heritability of the glycan clock of biological age.Frontiers in cell and developmental biology · 2022
    Article
  16. IntegratedCells · 2021
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Gordon GrevilleGlycoScience Group, the National Institute for Bioprocessing, Research and Training (NIBRT), Fosters Avenue, Mount Merrion, Blackrock, Co Dublin, Ireland.
Esther LlopBiochemistry and Molecular Biology Unit, Department of Biology, University of Girona, Girona, Spain.
Jane HowardCollege of Health and Agricultural Science (CHAS), UCD School of Medicine, University College Dublin (UCD), Belfield, Dublin 4, Ireland.
Stephen F MaddenData Science Centre, Royal College of Surgeons in Ireland (RCSI), Dublin 2, Ireland.
Antoinette S PerryUCD Conway Institute of Biomolecular and Biomedical Research, University College Dublin (UCD), Belfield, Dublin 4, Ireland.
Rosa PeracaulaBiochemistry and Molecular Biology Unit, Department of Biology, University of Girona, Girona, Spain.
Pauline M RuddGlycoScience Group, the National Institute for Bioprocessing, Research and Training (NIBRT), Fosters Avenue, Mount Merrion, Blackrock, Co Dublin, Ireland.
Amanda McCannCollege of Health and Agricultural Science (CHAS), UCD School of Medicine, University College Dublin (UCD), Belfield, Dublin 4, Ireland.
Radka SaldovaGlycoScience Group, the National Institute for Bioprocessing, Research and Training (NIBRT), Fosters Avenue, Mount Merrion, Blackrock, Co Dublin, Ireland. radka.fahey@nibrt.ie.ORCID 0000-0001-5085-5080
University College Dublin · IEUniversitat de Girona · ESRoyal College of Surgeons in Ireland · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlycosylation, one of the most fundamental post-translational modifications, is altered in cancer and is subject in part, to epigenetic regulation. As there are many epigenetic-targeted therapies currently in clinical trials for the treatment of a variety of cancers, it is important to understand the impact epi-therapeutics have on glycosylation.

resultsOvarian and triple negative breast cancer cells were treated with the DNA methyltransferase inhibitor, 5-AZA-2-deoxycytidine (5-AZA-dC). Branching and sialylation were increased on secreted N-glycans from chemo-sensitive/non-metastatic cell lines following treatment with 5-AZA-dC. These changes correlated with increased mRNA expression levels in MGAT5 and ST3GAL4 transcripts in ovarian cancer cell lines. Using siRNA transient knock down of GATA2 and GATA3 transcription factors, we show that these regulate the glycosyltransferases ST3GAL4 and MGAT5, respectively. Moreover, 5-AZA-dC-treated cells displayed an increase in migration, with a greater effect seen in chemo-sensitive cell lines. Western blots showed an increase in apoptotic and senescence (p21) markers in all 5-AZA-dC-treated cells. The alterations seen in N-glycans from secreted glycoproteins in 5-AZA-dC-treated breast and ovarian cancer cells were similar to the N-glycans previously known to potentiate tumour cell survival.

conclusionsWhile the FDA has approved epi-therapeutics for some cancer treatments, their global effect is still not fully understood. This study gives insight into the effects that epigenetic alterations have on cancer cell glycosylation, and how this potentially impacts on the overall fate of those cells.

Indexed as

beta-Galactoside alpha-2,3-SialyltransferaseCell Line, TumorCell MovementDecitabineDNA MethylationEnzyme InhibitorsEpigenesis, GeneticEpithelial-Mesenchymal TransitionFemaleGATA2 Transcription FactorGATA3 Transcription FactorGene Expression Regulation, NeoplasticGlycoproteinsGlycosylationHumansN-Acetylglucosaminyltransferasesbeta-Galactoside alpha-2,3-SialyltransferaseDecitabineEnzyme InhibitorsGATA2 Transcription FactorGATA3 Transcription FactorGlycoproteinsMgat5 protein, humanN-AcetylglucosaminyltransferasesRNA, MessengerRNA, Small InterferingSialyltransferasesST3GAL4 protein, human5-AZA-2′-deoxycytidineBreastCancerGlycosylationOvarian

Identifiers

PMID33579350
PMCPMC7881483
OpenAlexW3126400695

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.