Evidence map›Paper›PMID 33579305›Full record

ArticleJournal of orthopaedic surgery and research2021

Comprehensive analysis of lncRNA and mRNA based on expression microarray profiling reveals different characteristics of osteoarthritis between Tibetan and Han patients.

Junming Luo, Xiaoqin Luo, Zhili Duan, Wenbin Bai, Xiaoming Che, Zhongshu Shan, Xiaona Li, Jinwu Peng

Open access · goldAbstract read
In one paragraph

Article in Journal of orthopaedic surgery and research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Junming LuoDepartment of Pathology, Xiangya Changde Hospital, Changde, 415000, Hunan, China.ORCID http://orcid.org/0000-0002-4993-8492
Xiaoqin LuoDepartment of Pathology, Qinghai Provincial People's Hospital, Xining, 810007, Qinghai, China.
Zhili DuanDepartment of Pathology, Qinghai Provincial People's Hospital, Xining, 810007, Qinghai, China.
Wenbin BaiDepartment of Orthopedic Surgery, Qinghai Provincial People's Hospital, Xining, 810007, Qinghai, China.
Xiaoming CheDepartment of Orthopedic Surgery, Qinghai Provincial People's Hospital, Xining, 810007, Qinghai, China.
Zhongshu ShanDepartment of Orthopedic Surgery, Qinghai Provincial People's Hospital, Xining, 810007, Qinghai, China.
Xiaona LiDepartment of Pathology, Qinghai Provincial People's Hospital, Xining, 810007, Qinghai, China.
Jinwu PengDepartment of Pathology, Xiangya Changde Hospital, Changde, 415000, Hunan, China. jinwupeng2005@aliyun.com.
Qinghai Provincial Peoples Hospital · CNCentral South University · CNThe First People's Hospital of Changde · CN

Funding

Chinese Natural Scientific Grant 81460022Chinese Natural Scientific Grant 81760396Hunan Provincial Innovation Fund S2017SFYLJS0070Qinghai Natural Scientific Grant 2016-ZJ-747
6 · The paper itself

Abstract

backgroundOsteoarthritis (OA) is thought to be the most prevalent chronic joint disease, especially in Tibet of China. Here, we aimed to explore the integrative lncRNA and mRNA landscape between the OA patients of Tibet and Han.

methodsThe lncRNA and mRNA expression microarray profiling was performed by SurePrint G3 Human Gene Expression 8x60K v2 Microarray in articular cartilage samples from OA patients of Han nationality and Tibetans, followed by GO, KEGG, and trans-regulation and cis-regulation analysis of lncRNA and mRNA.

resultsWe found a total of 117 lncRNAs and 297 mRNAs differently expressed in the cartilage tissues of Tibetans (n = 5) comparing with those of Chinese Han (n = 3), in which 49 lncRNAs and 158 mRNAs were upregulated, and 68 lncRNAs and 139 mRNAs were downregulated. GO and KEGG analysis showed that several unreported biological processes and signaling pathways were particularly identified. LncRNA-mRNA co-expression analysis revealed a remarkable lncRNA-mRNA relationship, in which OTOA may play a critical role in the different mechanisms of the OA progression between Tibetans and Chinese Han.

conclusionThis study identified different lncRNA/mRNA expression profiling between OA patients of Tibetans and Han, which were involved in many characteristic biological processes and signaling pathways.

Indexed as

Genetics, PopulationAsian PeopleCartilage, ArticularChinaGene ExpressionGene Expression ProfilingHumansOsteoarthritisRNA, Long NoncodingRNA, MessengerTibetTissue Array AnalysisRNA, Long NoncodingRNA, MessengerlncRNA-mRNAMicroarray profilingOsteoarthritisOTOATibetan

Identifiers

PMID33579305
PMCPMC7879695
OpenAlexW3126197530

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