Evidence map›Paper›PMID 33579221›Full record

ArticleBMC cancer2021

A 4-gene signature predicts prognosis of uterine serous carcinoma.

Hui Chen, Lingjun Li, Ping Qin, Hanzhen Xiong, Ruichao Chen, Minfen Zhang, Qingping Jiang

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hui Chen *Department of Pathology, School of Basic Medical Science, Guangzhou Medical University, Guangzhou, China.
Lingjun Li *Department of Pathology, Third Affiliated Hospital, Guangzhou Medical University, Guangzhou, China.
Ping Qin *Department of Pathology, Third Affiliated Hospital, Guangzhou Medical University, Guangzhou, China.
Hanzhen XiongDepartment of Pathology, Third Affiliated Hospital, Guangzhou Medical University, Guangzhou, China.
Ruichao ChenDepartment of Pathology, Third Affiliated Hospital, Guangzhou Medical University, Guangzhou, China.
Minfen ZhangDepartment of Pathology, Third Affiliated Hospital, Guangzhou Medical University, Guangzhou, China.
Qingping JiangDepartment of Pathology, Third Affiliated Hospital, Guangzhou Medical University, Guangzhou, China. Jiangqingping@gzhmu.edu.cn.
Guangzhou Medical University · CNThird Affiliated Hospital of Guangzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUterine serous carcinoma (USC) is an aggressive type of endometrial cancer that accounts for up to 40% of endometrial cancer deaths, creating an urgent need for prognostic biomarkers.

methodsUSC RNA-Seq data and corresponding patients' clinical records were obtained from The Cancer Genome Atlas and Genotype-Tissue Expression datasets. Univariate cox, Lasso, and Multivariate cox regression analyses were conducted to forge a prognostic signature. Multivariable and univariable cox regression analysis and ROC curve evaluated the prediction efficiency both in the training and testing sets.

resultsWe uncovered 1385 genes dysregulated in 110 cases of USC tissue relative to 113 cases of normal uterine tissue. Functional enrichment analysis of these genes revealed the involvement of various cancer-related pathways in USC. A novel 4-gene signature (KRT23, CXCL1, SOX9 and ABCA10) of USC prognosis was finally forged by serial regression analyses. Overall patient survival (OS) and recurrence-free survival (RFS) were significantly lower in the high-risk group relative to the low-risk group in both the training and testing sets. The area under the ROC curve of the 4-gene signature was highest among clinicopathological features in predicting OS and RFS. The 4-gene signature was found to be an independent prognostic indicator in USC and was a superior predictor of OS in early stage of USC.

conclusionsOur findings highlight the potential of the 4-gene signature as a guide for personalized USC treatment.

Indexed as

Gene Expression Regulation, NeoplasticAgedATP-Binding Cassette TransportersBiomarkers, TumorCase-Control StudiesChemokine CXCL1Computational BiologyCystadenocarcinoma, SerousDatabases, GeneticEndometrial NeoplasmsFemaleHumansKeratins, Type IPrognosisSOX9 Transcription FactorSurvival RateABCA10 protein, humanATP-Binding Cassette TransportersBiomarkers, TumorChemokine CXCL1CXCL1 protein, humanKeratins, Type IKRT23 protein, humanSOX9 protein, humanSOX9 Transcription FactorBiomarkersMortalityRecurrenceSignatureUterine serous carcinoma

Identifiers

PMID33579221
PMCPMC7881619
OpenAlexW3109347020

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.